Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3713 ATGGCACTCTTTCTTCTCCACGAAACTGCTCTTGGTTATGCCTTGTTCGAAGCTCATGGAATCGACGAAATCGGTCAGAACACTGAAGCTGTTCGCAACTCTGTTACCGATTTGAGCCGCTTTGGTAAGGTTGTTAAGCTTCGTTCTTTCAACCCTTTTACCTCTGCTCTTGAAAGTCTCGAACAAATCAACGCCGTTTCTGAAGGTATTATGACCGATGAGCTGAGGACTGTTTTGGAGACTAACTTACCTAAAGTTAAGGAAGGTAAGAAGGCAAAGTTCAGCTTAGGCGTAGCAGAGTCTAAGATTGGTTCACATATACATGAAGCAACTAAAATTCCGGTTCAAAGTAACGAGTTTGTGGGCGAACTTATTCGTGGTGTCAGGCAACATTTTGACAAGTTTGTTGGTGATCTCAAGCAAGGAGATTTGGAAAAGGCACAGCTTGGTCTTTGCCACAGTTACAGCAGAGCTAAGGTTAAATTTAATGTCAACCGGGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGACACACTTGATAAGGATGTCAATTCATTCGCCATGAGAGTCAGAGAGTGGTATTCATGGCATTTTCCTGAACTTGTGAAGATTGTAAATGATAATTATTTGTACTGCAAAGTTGCAAAATTTATTGAGGATAAGTCTAAGTTGGCTGAAGACAAAATCGAATCCTTAACTGACTTGGTTGGTGATGAAGATAAAGCAAAAGAGATTGTAGAAGCCGCCAAAGCGTCAATGGGACAAGATTTGTCCCCTGTGGACTTGATCAATGTCCATATGTTTGCACAAAGGGTGATGGACCTATCTGATTACAGGAGAAGGTTGTCTGATTATCTGAGCACTAAAATGAATGATATTGCACCAAATTTGCAGTCGCTAGTTGGTGATAGTGTTGGTGCTCGTTTGATATCCCATGCTGGTAGTCTCACAAATTTAGCTAAGTGCCCCTCTTCAACTCTCCAGATTCTCGGTGCAGAGAAGGCTTTGTTTAGGGCATTAAAAACAAGAGGAAACACTCCTAAATATGGTCTTATATTCCACTCTTCTTTTATTGGTCGAGCATCTGCCAGAAACAAAGGCCGAATGGCTCGATATCTTGCTAACAAATGCTCGATTGCGTCACGAATAGATTGCTTTTCTGAAAAGGGTACATCAGCATTTGGGGAGAAACTCCGTGAGCAAGTTGAAGAGCGACTTGACTTTTATGATAAGGGAGTTGCCCCTCGTAAGAACATTGATGTGATGAAATCTGCTATTGAAAGTGTTGATAACAAAGACACAGAAATGGAAACAGAAGAAGTTTCAGCCAAGAAAACCAAGAAGAAGAAGCAAAAAGCTGCAGATGGAGATGACATGGCTGTAGATAAGGCTGCAGAAATTACAAATGGTGATGCGGAGGATCACAAGTCAGAAAAGAAGAAGAAAAAGAAAGAGAAGAGAAAGTTGGACCAGGAGGTTGAAGTTGAGGATAAGGTTGTAGAAGATGGTGCCAATGCTGATTCAAGCAAGAAGAAGAAAAAGAAATCAAAAAAGAAGGATGCTGAATAA 1575 0.4095 MALFLLHETALGYALFEAHGIDEIGQNTEAVRNSVTDLSRFGKVVKLRSFNPFTSALESLEQINAVSEGIMTDELRTVLETNLPKVKEGKKAKFSLGVAESKIGSHIHEATKIPVQSNEFVGELIRGVRQHFDKFVGDLKQGDLEKAQLGLCHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDVNSFAMRVREWYSWHFPELVKIVNDNYLYCKVAKFIEDKSKLAEDKIESLTDLVGDEDKAKEIVEAAKASMGQDLSPVDLINVHMFAQRVMDLSDYRRRLSDYLSTKMNDIAPNLQSLVGDSVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSEKGTSAFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAIESVDNKDTEMETEEVSAKKTKKKKQKAADGDDMAVDKAAEITNGDAEDHKSEKKKKKKEKRKLDQEVEVEDKVVEDGANADSSKKKKKKSKKKDAE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3713 524 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Mtr4g3713 524 Gene3D Nop domain 299 424 IPR042239 -
Mtr4g3713 524 MobiDBLite consensus disorder prediction 432 511 - -
Mtr4g3713 524 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Mtr4g3713 524 PANTHER BNACNNG34340D PROTEIN 1 519 - -
Mtr4g3713 524 SMART NOSIC_2 170 222 IPR012976 -
Mtr4g3713 524 MobiDBLite consensus disorder prediction 432 524 - -
Mtr4g3713 524 Gene3D - 140 298 - -
Mtr4g3713 524 Coils Coil 474 494 - -
Mtr4g3713 524 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 519 IPR045056 GO:0030515|GO:0031428|GO:0032040
Mtr4g3713 524 Coils Coil 217 237 - -
Mtr4g3713 524 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Mtr4g3713 524 SUPERFAMILY Nop domain 163 412 IPR036070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3713 Mtr-Chr4 50886029 50889685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3713 K14564 - gmx:100815506 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3713 4 50886029 50889685 Mtr4g3713 4 50886029 50889685 ECH