Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3700 ATGGATTCAACTTCTTCTTCTTCTTCTCCCGGCGCTTCTCAATTCCTCGCTAATCTTCCCCTTCGCGGCACCTTCACTTCCACCGCCATTTCTTCCAATCCGGATCGGATGCGGGTTTATGTATGCGATCATGAGACCACACCGCCAGAAGGGCAACATATTAAGACTAATCAACAGAACATACTGATCAGAGCACTCAAATTGAAGAATGTATCTGACAGTTCAAAAAAGAGAACTGCTGAAAAGGTTTTGGGAGCTTCAGCCAAGAAACTAAATAATCAAACCACCCCTCAACAAGAGGGATCAAATGGTCAAACATCCAGTAGGAACTTCCAGAGCTTGACTGTAGAGAGGCTCCGAGCTCTTTTGAGAGCTAAAGGTCTTCCAACCAAAGGAAAGAAGGAGGAGCTTATTACACGTCTAAAAGATGCTGATGGGCAAGCATAG 447 0.4497 MDSTSSSSSPGASQFLANLPLRGTFTSTAISSNPDRMRVYVCDHETTPPEGQHIKTNQQNILIRALKLKNVSDSSKKRTAEKVLGASAKKLNNQTTPQQEGSNGQTSSRNFQSLTVERLRALLRAKGLPTKGKKEELITRLKDADGQA* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3700 148 Pfam SAP domain 111 145 IPR003034 -
Mtr4g3700 148 ProSiteProfiles SAP motif profile. 111 145 IPR003034 -
Mtr4g3700 148 Gene3D SAP domain 86 148 IPR036361 -
Mtr4g3700 148 SMART sap_9 111 145 IPR003034 -
Mtr4g3700 148 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 4 143 - -
Mtr4g3700 148 MobiDBLite consensus disorder prediction 72 110 - -
Mtr4g3700 148 MobiDBLite consensus disorder prediction 88 110 - -
Mtr4g3700 148 SUPERFAMILY SAP domain 107 143 IPR036361 -
Mtr4g3700 148 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 4 143 IPR033575 GO:0032434
Mtr4g3700 148 Pfam Det1 complexing ubiquitin ligase 15 69 IPR018276 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3700 - - aprc:113850031 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3700 4 50765019 50768590 Mtr4g3700 4 50765019 50768590 ECH