Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3639 ATGGCTGATATATTCGCATGGCTCTTCTCCTTCTTCACCCTCATTGCCTTAATTGTAATTATTATTTATCAGTTAATGTGCTTGGCAGACCTTGAATTTGATTATATAAATCCTTATGATTCTGCATCTCGAATAAACAAAATGGTTTTGCCTGAGTATATCACAGTAGCTGCCCTGTGCGGTTTCTACCTTGTAACAGGACATTGGGTTATGGCACTGTTGTGTGCTCCTTACCTCTACTACAATTATAGATTGTACAGTCAAGGAAAGCATCTGGTTGATGTTACAGAGATATTCAACATGCTCGCTCGGGAAAAGAAGCAACGGCTTATCAAACTCTTCTATCTGATATTTATCCTATTCCTCTCCTTATTCTGGTTGATCTACACATCATTGGACGACCCTTATGATTAG 414 0.3865 MADIFAWLFSFFTLIALIVIIIYQLMCLADLEFDYINPYDSASRINKMVLPEYITVAALCGFYLVTGHWVMALLCAPYLYYNYRLYSQGKHLVDVTEIFNMLAREKKQRLIKLFYLIFILFLSLFWLIYTSLDDPYD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3639 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Mtr4g3639 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
Mtr4g3639 137 PANTHER CORNICHON-RELATED 1 135 - -
Mtr4g3639 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3639 Mtr-Chr4 50163010 50165466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3639 K20368 - gmx:100799061 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3639 4 50163010 50165466 Mtr5g0370 5 3421248 3423565 PCT