Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3636 ATGGAATGGTCAGCATGTACGGATGAGTACGAGAAGCTTGTTTTTCGCATGAGCACTCCTAGGGTCGTCATTGACAATGCCGTTTGTTCCAATTCAACCATAGTCAAGTTTGATAGTGCCAGAAAGCATGGAATTCTTTTGGAAGCTGTACAAATTCTCAGTGATTTAAACCTTTTTATTAAGAAAGCATATGTTTCATCTGATGGAAGATGGTTCATGGATGTTTTTCATGTCACTGATCAAAATGGAAACAAGTTAACAGATGAGAGCGTTTTAAAATATATTGAACAGTCACTCAGTAGCATTTACAATGGTAAAACAAATCACAGAAACGGTCTCACTGCGTTAGAATTGAAGGGCACGGATCGCGTTGGTCTTCTTTCTGAGGTGTTTGCTGTTTTGGCCGAGCTGCAATGTGATGTGGTGGAGGCTAAAGTTTGGACTCACAATGGCCGAACGGCCTCCTTAATTTATGTTAAAGACAGCATCACTGGGACATCTATTGAGGATTCTCAGAAAATTAATCGGCTTGAAGCACGTTTAAGATATGTTTTACAAGGAGATAGTGATATTAGGAGTGCAACAACATCTATCTCTGATGCTGTTATACATCCTGAAAGAAGGCTTCACCAAATGATGTTTGCAGACCGTGATTATCAGATGAATCCAATTTTCAAGTTTAGTTCTGAAACGCCGGTAGTGACTGTACAGAATTGGGCAGAAAGGGGTTATTCAGTTGTTAATGTTCAGTGCAAGGATCGAGTTAAGTTGTTGTTTGATGTTGTGTGCAATTTAACTGACATGGAATATGTTGTGTTCCATGCAACTATCAACACAAGGGTTGACCAAGCATACATGGAGTTTTACATTAGACACAAGGATGGAACCCCAATTAGTTCAGAACCGGAGCGTCAACGTGTGATTCAATGCTTGCAAGCTGCAGTAGAGAGAAGATCATGCGAGGGTGTTAGGCTTGAGCTATGCACCGAAGACAGACAAGGGCTTCTCGCCGAGGTGATGAGAACATTCCGAGAGAACGGATTAAATGTGACTAGGGCCGACATAACTACGACTGGGGACTTGGCTGCAAATGTTTTCTATGCAACAGATGCCATTGGATACCCAGCTGACCAAAAAATCATCGAATCAGTTCGTCAAAAAATTGGTTTAACCAATTTAAAAGTAAAGGAGTTGCCTTTTGCAAGTCATCAAAAGGTAGAGAGGGAAGATCAATCAGTTGGAGTTGGAGGGGCAGTGTTATTGTCTCTTGGTAGCATAGTGAGAAGGAATCTGTACAATTTGGGTTTAATCAAATCTTGTTCTTAA 1326 0.4087 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSSDGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGLTALELKGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEARLRYVLQGDSDIRSATTSISDAVIHPERRLHQMMFADRDYQMNPIFKFSSETPVVTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEFYIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRADITTTGDLAANVFYATDAIGYPADQKIIESVRQKIGLTNLKVKELPFASHQKVEREDQSVGVGGAVLLSLGSIVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3636 441 SUPERFAMILY ACT-like 321 395 IPR045865 -
Mtr4g3636 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Mtr4g3636 441 SUPERFAMILY ACT-like 111 184 IPR045865 -
Mtr4g3636 441 CDD ACT_ACR_3 244 318 - -
Mtr4g3636 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Mtr4g3636 441 ProSiteProfiles ACT domain profile. 324 408 IPR002912 -
Mtr4g3636 441 Pfam ACT domain 325 384 IPR002912 -
Mtr4g3636 441 Gene3D - 113 186 - -
Mtr4g3636 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Mtr4g3636 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Mtr4g3636 441 CDD ACT_ACR_1 33 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3636 Mtr-Chr4 50135508 50138485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3636 - - gmx:100794729 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3636 4 50135508 50138485 Mtr4g3636 4 50135508 50138485 ECH