Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3621 ATGGCTTCTTCACCTCTCTTCCTCTTTCTCATCAACATTTTCTTTCTTCTCACACTCTCTTATGCTGAAGATGCATTTGTTCCCTATGAGTTTGAGGTCTCATACATCACTGCTTCTCCTCTTGGAGTACCCCAACAGGTCATTGCTATCAACAAACAGTTTCCAGGTCCTACTATTAATGTTACCACAAACAACAATGTTGCTGTGAATGTCCACAACAAATTGGATGAAAATCTCCTCATTCATTGGTCTGGGGTTCAGCAAAGGAGGAGTTCATGGCAAGATGGTGTTCTTGGAACAAATTGTCCTATTCCACCAAAATGGAACTGGACTTACCAATTTCAAGTGAAGGATCAGATTGGAAGTTTTTTCTACTTTCCTTCACTTAATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTCATCATAAACAACCGACCCGTCATTTCGGTTCCTTTTGATACTCCAGAAGGGGACATTGTTGTTTTTATTGGTGATTGGTACACGCGCAATCACACGGCTTTGAGAAAGGCTCTAGATGATGGAAAAGATCTTGGCATGCCAGATGGTGTTCTCATCAATGGGAAAGGCCCTTATAGATACAATGATACACTTGTTCCTGAGGGCATTGATTTTGAACAAATTGATGTCAAACCAGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAGACTGAAGGCTCATATACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTTCAGATTACTACATTGTCGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAACGAGTTACTGGAGTCGGTATCTTGCACTATTCAAATTCCAAGGGGAAAGCAAGAGGTCATTTACCACCGGGTCCAGATGATCAATTTGACAAAACTTTCTCAATGAACCAAGCAAGATCTATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATATGGTTCCATCAACGTGACAGAGATTTACGTATTAAAAAATAAGCCACCAGTGAAAATCGATGGGAAGCGGAGAGCAACACTTAGTGGTATTTCTTTTGCCAATCCTGCCACTCCAATCAGGCTTGCTGACCATTACAAATTAAAGGGAGTATACAAGCTTGATTTTCCCACGAAGCCTCTAACCGGATCTCCTCGGGTAGAAACATCAGTAATCAATGGAAGCTTTAGAGGATTTATGGAAATTATACTCCAGAACAATGACACCAAGATGCATACTTATCACTTGAGTGGATATGCATTTTTTGTTGTAGGGATGGACTTCGGAGATTGGTCTGAGAATAGCAGGGGTACATATAACAAGTGGGATGGAATAGCTCGTTCTACAGCACAGGTTTATCCTGGAGCATGGACAGCAGTTTTGGTCTCCCTTGACAATGTTGGAGTTTGGAATCTAAGAACAGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAACCCGGAGCCTACTAACAAGACTGAGTTGCCGATGCCAGACAATGCTCTTAAATGTGGCAGACTTCAGCATTTGCAAAAGCCTCAAAAAATTATTTCATCTGCTTCAATCAATGGGAATGGGCTGAAGTTGTTATTCACTTTGGTGATGTTTGTATGTGCCATAATCAACATTTTCCAGTAA 1773 0.4083 MASSPLFLFLINIFFLLTLSYAEDAFVPYEFEVSYITASPLGVPQQVIAINKQFPGPTINVTTNNNVAVNVHNKLDENLLIHWSGVQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPEGDIVVFIGDWYTRNHTALRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPEGIDFEQIDVKPGKTYRLRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGVGILHYSNSKGKARGHLPPGPDDQFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPPVKIDGKRRATLSGISFANPATPIRLADHYKLKGVYKLDFPTKPLTGSPRVETSVINGSFRGFMEIILQNNDTKMHTYHLSGYAFFVVGMDFGDWSENSRGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDNALKCGRLQHLQKPQKIISSASINGNGLKLLFTLVMFVCAIINIFQ* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3621 590 SUPERFAMILY Cupredoxins 155 352 IPR008972 -
Mtr4g3621 590 SUPERFAMILY Cupredoxins 379 551 IPR008972 -
Mtr4g3621 590 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Mtr4g3621 590 SUPERFAMILY Cupredoxins 22 172 IPR008972 -
Mtr4g3621 590 Gene3D - 157 350 IPR008972 -
Mtr4g3621 590 Gene3D - 18 145 IPR008972 -
Mtr4g3621 590 Pfam Multicopper oxidase 160 312 IPR001117 -
Mtr4g3621 590 Pfam Multicopper oxidase 402 532 IPR011706 GO:0005507|GO:0016491
Mtr4g3621 590 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 12 561 - -
Mtr4g3621 590 Gene3D - 362 560 IPR008972 -
Mtr4g3621 590 PANTHER MULTI-COPPER OXIDASE 12 561 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3621 Mtr-Chr4 49962134 49966523 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3621 - - gmx:100788318 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3621 4 49962134 49966523 Mtr4g3621 4 49962134 49966523 ECH