Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3620 ATGAGAAACAACGACTCTCCCTATACACCTCTCCTAAATGGGCCCCACAATAACAATCGTAAGGAGCTTCTTCTCATTTTTTGTGGATTGTTTTTACTTGCTTCTCTAATAGCCTTCAGTGGCTACAAAGCTTCCGACAACGTTAGTGTCCCTCATGCTCACGTGTCCTCGTCATCTTCGATTTTATCCCATGAAGAAACAAAACCAAACATGGTTGTTTCACCAAGTGTTTCAGCTGGTGTGTCGGAGAAGTCAAATGTTTTTCTCTCCGGGCCCAATAAGGTTGGAGAAACTGAATCATTTCCATGGAACAATACTATGTTGTCGTGGCAGAGAACATCTTTTCATTTTCAACCAGAGAAGAATTGGATGAATGATCCTAATGGTCCTATGTATTACAAAGGATGGTACCACTTTTTCTACCAATACAATCCAAACGGTGCAGTTTGGGGAGATATAGTTTGGGGGCATGCTGTGTCAAGGGACATGATCCATTGGCTTCACCTTCCACTAGCAATGGTGGCCGATCAATGGTACGATAGTAACGGTGTTTGGACAGGCTCTGCTACCATCTTACCTGACGGTCAAGTCATCATGTTATATACTGGTTCAACCAATGAAACAGTGCAAGTCCAAAATCTTGCATACCCTGCTGATCTCAATGACCCTCTCCTTGTGGATTGGATCAAATACCCTGCCAACCCGGTTCTCGTCCCTCCACCAGGCATTCTTCCAAAGGACTTTCGCGACCCAACAACTGCTTGGCTCACTTCTGAAGGAAAATGGAGAATCACCATAGGCTCCAAGATTAACAAAACTGGCGTTGCTTTGGTTTACGACACAGTGGACTTCAAGACCTATGAGCGTAAAGAGGATTTGCTTGACGCTGTTCCTGGCACCGGTATGTGGGAGTGTGTGGACTTTTTCCCTGTTTCCATGAAGTCTGAAAATGGCTTGGATACTTCTGTTAATGGGGAGGAGGTTAAGCATGTGATGAAGGTGAGCTTGGATGATGATAGACATGATTACTATTCATTGGGAAATTATGATGAGAAGAAGGTTAAGTTCACAGCAGATGATTTGAAAAATGATGTTGGTATTGGACTTAGGTATGATTATGGTATATTCTATGCTTCCAAGACATTTTATGATCAGAAAAAGGATAGGAGAGTTTTGTGGGGTTGGATTGGAGAATCTGATAGCGAATATGCTGATGTCGCCAAAGGTTGGGCTTCAGTTCAGAGCATTCCAAGAATTGTGAAGCTTGATAAGAAGACTGGTAGCAACTTACTTCAATGGCCTGTTGCAGAAGTTGAAAGTTTGAGACTAAAAAGCGATGAATTTAAAAACTTGAAGGTCAAGCCAGGGTCAGTTGTGTCACTAGATATTGATACTGCCACACAGTTGGACATTTTAGCTGAATTTGAGATAGAAAAAGAAGCTCTGGAGAAAACAGCCCATTCCAATGTGGAGTATGAGTGCAGCAATAGTGGTGGAGCTTCTAAACGTGGTGCATTAGGACCTTTTGGTCTTTATGTTTTGGCAGATGGTGCTCTTTCTGAGTACACTCCTGTGTACTTTTATGTTGTTAAAGGAAGTGATGGAAAGCTTAAGACTTCTTTCTGCTCTGATCAATCAAGGTCTTCTCTAGCAAATGATGTTCATAAACAAATCTACGGGAGTGTAGTTCCAGTACTTGAAGGAGAAAAATTGTCCTTAAGGATATTGGTGGACCATTCTATAGTTGAAAGTTTTGCTCAAGGTGGAAGAACATGTATAACATCAAGAGTTTATCCAACAAGGGCAATTTATGGAGCTGCAAGATTGTTCTTATTCAACAATGCTATTGAGACCAATGTCACTGCCTCTCTCAAGGTTTGGCAGATGAATTCTGCATTTATACGCCCATACCACCCTGATCAAAAGAGCTAA 1932 0.4187 MRNNDSPYTPLLNGPHNNNRKELLLIFCGLFLLASLIAFSGYKASDNVSVPHAHVSSSSSILSHEETKPNMVVSPSVSAGVSEKSNVFLSGPNKVGETESFPWNNTMLSWQRTSFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDSNGVWTGSATILPDGQVIMLYTGSTNETVQVQNLAYPADLNDPLLVDWIKYPANPVLVPPPGILPKDFRDPTTAWLTSEGKWRITIGSKINKTGVALVYDTVDFKTYERKEDLLDAVPGTGMWECVDFFPVSMKSENGLDTSVNGEEVKHVMKVSLDDDRHDYYSLGNYDEKKVKFTADDLKNDVGIGLRYDYGIFYASKTFYDQKKDRRVLWGWIGESDSEYADVAKGWASVQSIPRIVKLDKKTGSNLLQWPVAEVESLRLKSDEFKNLKVKPGSVVSLDIDTATQLDILAEFEIEKEALEKTAHSNVEYECSNSGGASKRGALGPFGLYVLADGALSEYTPVYFYVVKGSDGKLKTSFCSDQSRSSLANDVHKQIYGSVVPVLEGEKLSLRILVDHSIVESFAQGGRTCITSRVYPTRAIYGAARLFLFNNAIETNVTASLKVWQMNSAFIRPYHPDQKS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3620 643 SUPERFAMILY Arabinanase/levansucrase/invertase 109 435 IPR023296 -
Mtr4g3620 643 Pfam Glycosyl hydrolases family 32 N-terminal domain 116 434 IPR013148 -
Mtr4g3620 643 SMART glyco_32 116 589 IPR001362 GO:0004553|GO:0005975
Mtr4g3620 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 434 633 IPR013320 -
Mtr4g3620 643 ProSitePatterns Glycosyl hydrolases family 32 active site. 116 129 IPR018053 GO:0004553|GO:0005975
Mtr4g3620 643 Gene3D Glycosyl hydrolase domain; family 43 120 445 IPR023296 -
Mtr4g3620 643 CDD GH32_Fruct1-like 122 422 - -
Mtr4g3620 643 Pfam Glycosyl hydrolases family 32 C terminal 437 628 IPR013189 -
Mtr4g3620 643 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 15 638 - -
Mtr4g3620 643 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 15 638 - -
Mtr4g3620 643 Gene3D - 446 629 - -
Mtr4g3620 643 Pfam Beta-fructofuranosidase, N-terminal domain 14 108 IPR021792 GO:0004564
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3620 Mtr-Chr4 49951129 49956037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3620 7 637 Glycoside Hydrolase AT1G12240 64.815 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3620 K01193 - gmx:100799487 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3620 4 49951129 49956037 Mtr4g3620 4 49951129 49956037 ECH