Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3613 ATGCGTGTGAAGGAAATGCACCCGTTGTGCTGCATCTCATTGGAGAGTCCAGGGATCGGAAGTAATTCACCAGAGTCATACACGGCGGCGCTTTCGAGGGCGAGGAGTTTACCGGCGAGTGGATCTGACTGCATTGTTCGCCGTGGAGGATCAGAAGCCACGGTTGCCGGAGTTCTTTACAAATGGACTAATTACGGCAAAGGATGGAGATCCCGATGGTTCCTCCTCCGCAATGGCGTACTTTCTTACTCCAAGATCCGTTCACCGGAGAATCTCAATCTGTTCTCTTCAATCGACGACGTTCACTTAATCGGAGATGTTACCACGTCTCGTCTCGCCAGAATGGATAGAGACGCCGGAAATGCTCTTCGCCGTCAGAAGAGTCATAAACCTTCTTCATCTTCTTCTCCTTCAGTTGTTCATCTAAAGATCTCATCTTTTAGAGAGAGCAAATCAGATGACAGAAAATTCTACATATTCACAGCAACAAAGACACTTCATTTGAGAACTGATTCAAGGAAAGACCGTGTAGCGTGGATACAAGCTTTGGTTTCAACTCGAAGCTTGTATCCACTAAACGGTCATCATCTATCTCTTGCACCCTATCATATATCTGTATCAACCGAGAGGCTGAAGAAACGTTTGCTTGAAGAGGGTAGCAGTGAAAATCTTGTGAAGGAGTGTGAGCAAATCATGCTTGCAGAGTTTTCAGATTTACAAGAGAAGCTTCAAATTCTTTGTCAAGAACGATCTGGTTTGTTTGATACCATTAGGCAATTAGAGGCAGCTAACCTTGAACCCGAGGGATCTGCTTTGCATGACAGCGAATACCAATTAACAAAGAATGGATTTTCCAGTCTAGGGCGTGGAAAATATAGCGAATGCAGTACAACGGAATCATCCGATGATATTGAAAAACACGAGGTAGAGGAAGTGTCAGAAGAAGATGAAATCTCATATTATGATACTAGAGACTATTTTTCAGACTCTGGTTTTAGGTGTGGGTCAAAAGGAGCACCAAATCGAGTGAACATGTCTGCGGAAGCTGTTAAACAAGGCATTGATATGGAAAATAGTCATGTTGAGACAATGATGTATGATGATTATGGGTATCCTCAGATAGTAAGGCGGAAAAAGCTTCCGGATCCTGTTGAGAAGGAGAAGGGCGTTAGTCTTTGGTCCATGATCAAAGACAATGTGGGCAAAGATCTCACACGCGTTTGCCTTCCAGTATACTTTAATGAGCCAATATCATCCCTTCAGAAATGTTTTGAGGATTTGGAGTACTCCTATCTTCTGGATAGAGCATATGAGCATGGGAAAAAGGGAAACAGTCTCCTTCGGGCATTGAACGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCAGAAGGTCGTCATTGTAAGCCCTTTAATCCCTTGTTAGGGGAAACTTACGAAGCCGACTTTCCTGACAAAGGAGTTCGCTTCTTTTCTGAGAAGGTTAGTCACCATCCAACAGTGGTTGCCTGCCATTGTGAAGGTAGAGGATGGAGGTTTTGGGCAGACAGTAACATTCATTCAAAGTTTTGGGGAAGGTCAATTCAACTTGACCCAGTTGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAGTGGAGCAAGGTTACTACTACAATATATAACCTTATCCTTGGCAAACTATATTGTGATCATCATGGGAATATGGAAATCCGTGGTAATCGCCAGTATTCCTGCAGGCTCAAGTTCAAAGAGCAGACGCTTCTTGACCGAAATCCTCGCCAGGTGACTGGATTTGTTGAAGATACAATGGGAAAAAAAGCAGCCACATTATTTGGCAAATGGGATGACAGCATTTATTATTTTGATGGTGATGTGAATGTCAAACCTAAAGATTACACTTCGTCAAATGGAACATTGTTGTGGAAAAGGACTAGGCCACCACCAAATCTGACTCGGTACAACTTGACATCATTTGCCATCACACTGAATGAGCTTACCCCAGGACTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCTGATCAACGACACTTAGAGAACGGGGAATTCGAGAAGGCAAATATGGAGAAACAAAGATTGGAAAAGAGACAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGGAACCTAAGTGGTTTCGCAAAGAAGGTGAAAATGGAACGTTTAGATATACCGGTGGATATTGGGAAGCAAGAGCTGTAGGATCATGGGATGGATGCCCAAATATATTTGGTGAATTTCAAGAAAGCATAATTGATCCTTTTGATGCATCTTGA 2313 0.4315 MRVKEMHPLCCISLESPGIGSNSPESYTAALSRARSLPASGSDCIVRRGGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYSKIRSPENLNLFSSIDDVHLIGDVTTSRLARMDRDAGNALRRQKSHKPSSSSSPSVVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVAWIQALVSTRSLYPLNGHHLSLAPYHISVSTERLKKRLLEEGSSENLVKECEQIMLAEFSDLQEKLQILCQERSGLFDTIRQLEAANLEPEGSALHDSEYQLTKNGFSSLGRGKYSECSTTESSDDIEKHEVEEVSEEDEISYYDTRDYFSDSGFRCGSKGAPNRVNMSAEAVKQGIDMENSHVETMMYDDYGYPQIVRRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEHGKKGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGVRFFSEKVSHHPTVVACHCEGRGWRFWADSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKLYCDHHGNMEIRGNRQYSCRLKFKEQTLLDRNPRQVTGFVEDTMGKKAATLFGKWDDSIYYFDGDVNVKPKDYTSSNGTLLWKRTRPPPNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEFEKANMEKQRLEKRQRMSRKMQENGWEPKWFRKEGENGTFRYTGGYWEARAVGSWDGCPNIFGEFQESIIDPFDAS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3613 770 Pfam Pleckstrin homology domain 57 183 - -
Mtr4g3613 770 Pfam Oxysterol-binding protein 391 744 IPR000648 GO:0008289
Mtr4g3613 770 Coils Coil 697 717 - -
Mtr4g3613 770 Gene3D - 50 189 IPR011993 -
Mtr4g3613 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 133 339 IPR000648 GO:0008289
Mtr4g3613 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 369 761 IPR000648 GO:0008289
Mtr4g3613 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 118 IPR000648 GO:0008289
Mtr4g3613 770 SUPERFAMILY PH domain-like 52 185 - -
Mtr4g3613 770 MobiDBLite consensus disorder prediction 120 139 - -
Mtr4g3613 770 ProSiteProfiles PH domain profile. 52 188 IPR001849 -
Mtr4g3613 770 SUPERFAMILY Oxysterol-binding protein-like 386 763 IPR037239 -
Mtr4g3613 770 PANTHER BNAC03G64980D PROTEIN 4 118 - -
Mtr4g3613 770 PANTHER BNAC03G64980D PROTEIN 133 339 - -
Mtr4g3613 770 PANTHER BNAC03G64980D PROTEIN 369 761 - -
Mtr4g3613 770 SMART PH_update 53 190 IPR001849 -
Mtr4g3613 770 Gene3D - 687 744 - -
Mtr4g3613 770 Gene3D - 477 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3613 Mtr-Chr4 49834954 49846026 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3613 K20456 - gmx:100793692 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3613 4 49834954 49846026 Mtr4g3613 4 49834954 49846026 ECH