Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3611 ATGGCTTCCAAAACTTGTTCCTCCCTTGCTATTTTCCTCACAATCAACATTCTCTTCTTTACACTTGTATCTTCTTGTGGAACTTGTGGCTCAGGTCCAAACCCAAACCCTAAGCCAAAGCATAAGCCAAGCCCAAACCATTCTGGAGGCTCGAGCCATTCAGGTGGATCTAGCCCCTATGGTGGCTCGACCCCTTCTGGAGGCTCAAGCCCCTCAGGTGGCTCTAGCCCTTCAGGGGGAAGTGGCACCGCCTCGTGCCCACGTGATGCACTCAAACTAGGTGTATGTGCCAATGTACTAAATGGATTGTTGAATGTTACTCTGGGTCAGCCACCAGTGACACCATGCTGCACCCTCCTAAATGGCCTTGTTGATCTTGAAGCTGCTGTGTGTCTTTGCACTGCCCTTAAAGCTAACATTTTGGGGATCAATCTCAACCTTCCTATCTCACTTAGCTTGCTTCTCAATGTTTGCTCAAAGCAAGCACCACGTGATTTCCAATGCTACTAA 510 0.4882 MASKTCSSLAIFLTINILFFTLVSSCGTCGSGPNPNPKPKHKPSPNHSGGSSHSGGSSPYGGSTPSGGSSPSGGSSPSGGSGTASCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCTLLNGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSKQAPRDFQCY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3611 169 PANTHER - 7 48 - -
Mtr4g3611 169 PANTHER - 65 168 - -
Mtr4g3611 169 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mtr4g3611 169 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 48 - -
Mtr4g3611 169 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 65 168 - -
Mtr4g3611 169 SMART aai_6 86 168 IPR016140 -
Mtr4g3611 169 Pfam Hydrophobic seed protein 86 168 IPR027923 -
Mtr4g3611 169 Gene3D - 84 169 IPR036312 -
Mtr4g3611 169 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 168 IPR036312 -
Mtr4g3611 169 CDD HPS_like 84 168 IPR027923 -
Mtr4g3611 169 MobiDBLite consensus disorder prediction 32 83 - -
Mtr4g3611 169 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3611 Mtr-Chr4 49795478 49796361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3611 75 168 Acyl Lipid Metabolism Gene Families AT4G22490 40.426 1.12e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3611 - - gmx:100798361 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3611 4 49795478 49796361 Mtr4g3611 4 49795478 49796361 ECH