Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3609 ATGGCTTCCAAAACTTGTTCCTCCCTTGCTATTTTCCTCACAATCAACCTCCTCTTTTTTTCACTTGTTTCAGCTTGTGGTTCCTATTCATGCAACCCTACTCCAAACCCAACCCCAAAACCAAAGCCAAGGCCAAACCCAAACCCTAACCCTAACCCAACCCCTTCAAGTGGCACATGCCCACGTGATGCTCTCAAACTTGGTGTATGTGCCAATGTCCTAAGTGGGTTGTTGAATTTAACTTTGGGTAAACCACCAGTAACCCCTTGTTGCTCACTCCTAAATGGCCTTGTTGATCTCGAGGCTGCAGCATGCCTTTGCACTGCCCTTAAAGCTAACATTTTGGGCATTAATCTCAACCTTCCAATTTCACTAAGCTTGCTTCTCAATGTTTGCTCAAGGAAAGTCCCACATGATTTTCAATGTGCTTAA 432 0.4468 MASKTCSSLAIFLTINLLFFSLVSACGSYSCNPTPNPTPKPKPRPNPNPNPNPTPSSGTCPRDALKLGVCANVLSGLLNLTLGKPPVTPCCSLLNGLVDLEAAACLCTALKANILGINLNLPISLSLLLNVCSRKVPHDFQCA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3609 143 Pfam Hydrophobic seed protein 59 143 IPR027923 -
Mtr4g3609 143 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mtr4g3609 143 Gene3D - 57 143 IPR036312 -
Mtr4g3609 143 MobiDBLite consensus disorder prediction 36 59 - -
Mtr4g3609 143 PANTHER BNAA08G24920D PROTEIN 6 142 - -
Mtr4g3609 143 SMART aai_6 60 142 IPR016140 -
Mtr4g3609 143 MobiDBLite consensus disorder prediction 36 56 - -
Mtr4g3609 143 CDD HPS_like 58 142 IPR027923 -
Mtr4g3609 143 PANTHER - 6 142 - -
Mtr4g3609 143 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 62 142 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3609 Mtr-Chr4 49781859 49782676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3609 50 142 Acyl Lipid Metabolism Gene Families AT4G22490 39.785 4.46e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3609 - - gmx:100801985 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3609 4 49781859 49782676 Mtr4g3609 4 49781859 49782676 ECH