Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3608 ATGTCATTATCAAAATCAAAAGCTCTATTCTTCATCTTTAAAATATTGATGTTGAATTTCATAACACCAATGATACATGCATGTGGTCCATGCACTCAGCCAAATCCACCACCTTACCACAAACCACCGAGCCATCCAAAACCAAAACATCCACCACATCACGGCGGAGGAGGAGGAAGGCCAATAGTGTTACCTCCTCCAGTGGTTGTTGTGCCACCCATTATCGTCACACCACCACTGCAACCACCTCCGACGATCATATATCCACCGCCAACAACCCCTCCTGTTTTTCCTCCTCCGAGTCCAAGGACTTGTCCAATTGATGCACTCAAGCTTGGACTTTGTTTGGATGTTCTTGGAGGAGTTGTTCATGTTGTAATTGGAAACCCTCTTAAGAATGTGTGTTGTCCTGTTATACAAGGATTGGTTGATCTTGAAGCTGCAATTTGTCTTTGTACTGCTATTAGGGCTAAGGTTCTTAATCTTAATATTTTTCTTCCACTTGCTCTTCAAGTTTTAATCACTTGTGGGAAGACTCCTCCTCCTGGTTTTGTTTGTCCACCTCTCTAA 570 0.4298 MSLSKSKALFFIFKILMLNFITPMIHACGPCTQPNPPPYHKPPSHPKPKHPPHHGGGGGRPIVLPPPVVVVPPIIVTPPLQPPPTIIYPPPTTPPVFPPPSPRTCPIDALKLGLCLDVLGGVVHVVIGNPLKNVCCPVIQGLVDLEAAICLCTAIRAKVLNLNIFLPLALQVLITCGKTPPPGFVCPPL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3608 189 Gene3D - 104 188 IPR036312 -
Mtr4g3608 189 Pfam Hydrophobic seed protein 104 187 IPR027923 -
Mtr4g3608 189 PANTHER - 4 188 - -
Mtr4g3608 189 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 107 188 IPR036312 -
Mtr4g3608 189 MobiDBLite consensus disorder prediction 36 58 - -
Mtr4g3608 189 CDD HPS_like 104 186 IPR027923 -
Mtr4g3608 189 SMART aai_6 105 186 IPR016140 -
Mtr4g3608 189 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 4 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3608 Mtr-Chr4 49773771 49774642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3608 104 188 Acyl Lipid Metabolism Gene Families AT4G22490 34.118 2.75e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3608 - - cam:101496757 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3608 4 49773771 49774642 Mtr4g3608 4 49773771 49774642 ECH