Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3607 ATGGCTTCCAAGGTTGCTATGCTCCTTTGCCTCAACATCATATTTTTCACTGTGGTAAGCTCCACATATGTTCCATGTCCCCCACCACCTCACAAAGATCACGGCCACTCACACCCTCATCATCCACCTTCCTCCAAAAACCCAACATGCCCTAGAGACACAATCAAGTTTGGTGTGTGTGCTGATGTATTGGGTTTGATTAATGTTGAGCTTGGTAAGCCACCAAAGACACCATGCTGCTCTCTCATTGATGGTCTTGCTAATCTTGAAGCTGCTGTGTGCCTTTGCACTGCTCTTAAGGCTAATGTCTTAGGCATTAACCTTAATCTTCCAATTAATTTGAGCTTGGTACTTAACTATTGTGGAAAGGGAGTTCCAAAGGGTTTCGTGTGCGCTTAA 399 0.4461 MASKVAMLLCLNIIFFTVVSSTYVPCPPPPHKDHGHSHPHHPPSSKNPTCPRDTIKFGVCADVLGLINVELGKPPKTPCCSLIDGLANLEAAVCLCTALKANVLGINLNLPINLSLVLNYCGKGVPKGFVCA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3607 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 131 IPR036312 -
Mtr4g3607 132 Pfam Hydrophobic seed protein 49 132 IPR027923 -
Mtr4g3607 132 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 132 - -
Mtr4g3607 132 SMART aai_6 50 131 IPR016140 -
Mtr4g3607 132 CDD HPS_like 47 131 IPR027923 -
Mtr4g3607 132 Gene3D - 47 132 IPR036312 -
Mtr4g3607 132 PANTHER - 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3607 Mtr-Chr4 49768923 49769821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3607 43 131 Acyl Lipid Metabolism Gene Families AT4G22490 35.165 5.37e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3607 - - gmx:100500229 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3607 4 49768923 49769821 Mtr4g3607 4 49768923 49769821 ECH