Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3599 ATGGCAAAGAGTTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAAAAATACCCTGACCGAATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGATCTCACAGTTGGACAGTTTGTCTATGTTATCCGTAAAAGAATTAAACTAAGTGCAGAAAAGGCCATCTTTATATTTGTAGACAATGTCCTTCCACCTACAGGAGCAATAATGTCAGCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTTGGAGATCTGATTTCCCATTAG 369 0.4092 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLISH* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3599 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Mtr4g3599 122 CDD Ubl_ATG8 12 114 - -
Mtr4g3599 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Mtr4g3599 122 Gene3D - 1 117 - -
Mtr4g3599 122 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Mtr4g3599 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3599 Mtr-Chr4 49695804 49698381 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3599 K08341 - gmx:100499835 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3599 4 49695804 49698381 Mtr4g3599 4 49695804 49698381 ECH