Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3596 ATGTCAAATCGAACAAATTTCTACAAGAATCCTTCAATCTCATATAACAGAAACTTAAGTCTATCCTCCGTTCTTCAGAATCTCCATGCTTACAACATCGCCACCGGTAACATTACTTCCGACGACCAACCACCTCCGGCTCCGGCTCCCACTGCTTCCCTCAAACGCCGACGCCATCCCCGTCCACCGCAATCCCGTCACAATCACCATAAGAATGACGTTGATGATGATCCTTCCTCTATGTCGCACACTGATTACATTCTAAAGAGAAGGAAAGAAGTTGATTCAGCTAAGAACTGTGATCGTGTTGAATTGACTGAAGATGTCTTGGGAAAATCTAATTCTGCTCTATCCTTGGTGGATTATGCAAGTGATGAAAGTGATTCTTCGGAATGGCACAAAGAAGAATCCATCAATGGAGTCAAAAGTAGAAATGAGCAGCGTTTTCCTGTATCTGGAGAACCTGTTTGTCTTATATGTGGAAGATATGGTGAATATATATGCAATGAGACAGATGATGATGTCTGTAGCATGGAGTGCAAAAATGAACTTTTGGAAGTTCTTAAACTCAATGAGGGAACCTCCCATAACCAAGCTGAAGATTTCTCCCATGACCAAGCTAAAGATTTCTCCTCATCTGGAATTAGAGATGCCTTACCAGCTCCTGTCTTTAGCGATGATACCTGGGATTATAATCGGCACCGCTGGTCAAAAACGAGATCTAGTCTTTCTACTTATGAATGTTGGAAATGTCAAAGACCTGGCCACTTAGCTGAAGATTGTCTAGTGAAGAGTTGCAGTGAGATTACTGTGGGAAGAAGTAATAGATCCAGTTCCATTCCAAAGGATCTTCTTGGGCTGTATAGAAGATGCCACCAGCTTGGTAAAGACTTGTTGGCTGCAAACTGTAATACATGCCGCAGCTCATTGAATCTGGCCACATGCATCGACTGTAGTATTGTTCTTTGTGATGGGGCAGGTCACTTGGATGATCATATAAGAACACACCCTTCGCATCAAAAATATTACTCACACAAGCTAAAACGTCTGGTTAAATGCTGCAAGTCAACTTGCAAGGTCACTGACATCAAAGATCTCTTGGTTTGTCACTATTGCTTCGATAAAGCCTTTGAAAAGTTCTATGACATGTATACTGCAACATGGAAAGGCGCCGGGTTTTCAATTATATCGGGTTCTATATGCTGTGAAGACCACTTCACATGGCACAGGATGAATTGTTTGAATGCAGGTGCAGAAGAAAGTGCATATATCGTACAAAGGAATGGCCACAAAGGCAAACGTACACAACTTAGTGATTTCATTTTTTGA 1329 0.4191 MSNRTNFYKNPSISYNRNLSLSSVLQNLHAYNIATGNITSDDQPPPAPAPTASLKRRRHPRPPQSRHNHHKNDVDDDPSSMSHTDYILKRRKEVDSAKNCDRVELTEDVLGKSNSALSLVDYASDESDSSEWHKEESINGVKSRNEQRFPVSGEPVCLICGRYGEYICNETDDDVCSMECKNELLEVLKLNEGTSHNQAEDFSHDQAKDFSSSGIRDALPAPVFSDDTWDYNRHRWSKTRSSLSTYECWKCQRPGHLAEDCLVKSCSEITVGRSNRSSSIPKDLLGLYRRCHQLGKDLLAANCNTCRSSLNLATCIDCSIVLCDGAGHLDDHIRTHPSHQKYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGFSIISGSICCEDHFTWHRMNCLNAGAEESAYIVQRNGHKGKRTQLSDFIF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3596 442 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 442 - -
Mtr4g3596 442 Gene3D - 241 289 - -
Mtr4g3596 442 SUPERFAMILY Retrovirus zinc finger-like domains 232 261 IPR036875 GO:0003676|GO:0008270
Mtr4g3596 442 MobiDBLite consensus disorder prediction 67 82 - -
Mtr4g3596 442 MobiDBLite consensus disorder prediction 36 82 - -
Mtr4g3596 442 ProSiteProfiles Zinc finger CCHC-type profile. 248 261 IPR001878 GO:0003676|GO:0008270
Mtr4g3596 442 Gene3D - 137 195 - -
Mtr4g3596 442 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3596 Mtr-Chr4 49671388 49678263 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3596 - - gmx:100814892 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3596 4 49671388 49678263 Mtr4g3596 4 49671388 49678263 ECH