Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3527 ATGTACAAAGGTCGTGGTGGTTCTGCCTCCAAATCGGAGGATCGAAAGCGAATCAACGATGTTCTCGATAAGCAGCTTGAACGATCTTCTCCTTCAACTTCGCGTCCCATCAATGGCAAAAGCAACAAAGAGAGAGAAACCAATACCATCAAGGATCCTCTTCTTCAACGATCCTCCAAAACTGCCAATATCTCTGAGGAGTCTGAAACAGACAGTGAAGAGTCAGATGTGAGTGGTTCTGATGGAGAGGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTTTGTGGATTGAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTCATGAGGAACAAAACGAGTTAATTGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCGCGATACATATTGACAAGCAAAGGAATGGCTGCTATGCTTGACAAGTACAAGAACTATGACTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAACCTTGTCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGCCCTAGGTGTGAAGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCGCAGAAACCAGCTCAGGGCTACGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA 807 0.43 MYKGRGGSASKSEDRKRINDVLDKQLERSSPSTSRPINGKSNKERETNTIKDPLLQRSSKTANISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKLHKP* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3527 268 Gene3D - 179 253 - -
Mtr4g3527 268 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 267 - -
Mtr4g3527 268 MobiDBLite consensus disorder prediction 8 24 - -
Mtr4g3527 268 Pfam Casein kinase II regulatory subunit 86 264 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 SMART CK_II_beta_2 86 264 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PRINTS Casein kinase II regulatory subunit family signature 86 102 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PRINTS Casein kinase II regulatory subunit family signature 103 117 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PRINTS Casein kinase II regulatory subunit family signature 153 174 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PRINTS Casein kinase II regulatory subunit family signature 178 199 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PRINTS Casein kinase II regulatory subunit family signature 200 221 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PRINTS Casein kinase II regulatory subunit family signature 228 245 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 ProSitePatterns Casein kinase II regulatory subunit signature. 182 213 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 PANTHER CASEIN KINASE II SUBUNIT BETA 1 267 IPR000704 GO:0005956|GO:0019887
Mtr4g3527 268 SUPERFAMILY Casein kinase II beta subunit 84 267 IPR035991 GO:0005956|GO:0019887
Mtr4g3527 268 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 79 178 IPR016149 GO:0005956|GO:0019887
Mtr4g3527 268 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3527 Mtr-Chr4 49007445 49011394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3527 K03115 - gmx:100780095 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3527 4 49007445 49011394 Mtr4g3527 4 49007445 49011394 ECH
Mtr5g0475 5 4349416 4353217 Mtr4g3527 4 49007445 49011394 PCT