Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3524 ATGGATCAGTTGTCGGCGATCAGCGAGGATCTGGCGGAGATCGACGGACGCGTCGCCGACAATTTCCGCGCTCTATCAAATGGATTTCAGAAGCTGGAGAAAATTAAGGATGCGAGTAGAAAGAGCAGGCAATTGGAAGAACTCACCGAGAAAATGCGAGAATGTAAAGGGCTTATCAAAGAGTTTGATAAAGAAGTCAAAGCTTTGGAGGCTAGTTTTGATAGAGAAACAACCAAATTTTTGAATGAGAAAAAGCAGTCAATGATCAAAGAATTGAATTCATATGTTGCTTTGAAAAAACAATACGCTTCAAATATTGAGAATAAGCGAATTGAACTCTTTGAGGGGCCCAATGAAGGTGACACAGAAGAAAATGTCTTGCTAGCTTCCGCAATGTCAAATGAACAGCTAATGGATCATGGGAATCGGATGATGGATGACACAGATCAAGCCATTGAGCGGGGAAAAAGGATTGTTCAAGACACGGTAAATATTGGTACTGAGACTGCTGCAGCTCTTAAGGCACAGACGGAACAAATGAGCAGAGTTGTCAATGAGCTGGATTCTATCCATTTTTCTATAAAGAAAGCATCTAAATTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGCATTACTGTTCCTCATCGTCATTGGAGTAATTGCTATCATTATTGTAAAGCTTGTACATCCAGAGAACAAGGACATTCGCGACATTCCAGGATTAGCTCCTCCTGTTGTCACGAACAACAGAAGACTGCTTTGGAATCACAGTTGA 792 0.4154 MDQLSAISEDLAEIDGRVADNFRALSNGFQKLEKIKDASRKSRQLEELTEKMRECKGLIKEFDKEVKALEASFDRETTKFLNEKKQSMIKELNSYVALKKQYASNIENKRIELFEGPNEGDTEENVLLASAMSNEQLMDHGNRMMDDTDQAIERGKRIVQDTVNIGTETAAALKAQTEQMSRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPPVVTNNRRLLWNHS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3524 263 Pfam Sec20 150 231 IPR005606 GO:0005484|GO:0006890
Mtr4g3524 263 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Mtr4g3524 263 PANTHER NOVEL PLANT SNARE 11 1 250 - -
Mtr4g3524 263 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Mtr4g3524 263 SMART tSNARE_6 137 204 IPR000727 -
Mtr4g3524 263 Coils Coil 38 79 - -
Mtr4g3524 263 Gene3D - 133 212 - -
Mtr4g3524 263 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
Mtr4g3524 263 SUPERFAMILY SNARE fusion complex 132 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3524 Mtr-Chr4 48983419 48989235 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3524 K08494 - gmx:100786429 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3524 4 48983419 48989235 Mtr4g3524 4 48983419 48989235 ECH