Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3521 ATGGATGGTCTGATCAAGGGGTTGATCGACGTAGCTCTCGGCGGCAACAACAATCACGATCAGCAGGATAATGATCGCGACGAACGTTCCAGATCCTCTTGGTCTGAGGTTGTTTCCGGTGATCAGGAGAAGGATTCCGATCACCATCCTCAGAAGGAGGAAGTAGAAACATGGCAAGACAATAGTAACCGTCATAGTCCTCGGCCTCATAAGGAACAATATCGTCCTCAGACTCAGAGGCAGGAGTATGAATCTGAAACTTTCAACTCTCCCAACAGACACAACAAGGAACAATATCGTCCTCAGCAGCAGGAGTATGAATCTGAAACGTTCAACACCTCCAACAGACCCAACAAGTCAGATGAAGGTAACAACGATGGATGGCAGACTGTGGGCAAACCTTCAAAACAGACACACAAGGTTCCCAAGGATAACTGGAACAGCTATAAACGACCTGCTGATGAGCAACAATACTCCAACGAAGTTGAAGTTGGTTCCAGAGTGGAGCCCTCAGAAGATGAACTTGCTGATCTATCCAGAGCTTGCGAAAAACTCTGGGATCTGGATTTAAATCGTTTGACACCTGGCAAGGATTATGAAATTGACTGTGGTGAAGGGAAAAAAGTTTACCAAAAGGATGATATGGCTCAGGGGAGCTTGTTTACATGGGTTAGTGATGATGTATTCAGAAAGCCTACCTATGCTAGATTTCTTTCACTGTTAGATAATTACAATCCACATCAAGGATCTAAGGAGGTTGTCACATCTGAAGAAAAACAAGAGCAAGCTTCCTTCATAGAAGAAATTAGTAGAACAGCACCGATTAAATATCTTCACAAGTTTCTTGCATCGAAAAGAATCACATCTGGGAGTTCCCAAGATTTCAAACGATTGTTGACCAGTTTGTGGTTTGACCTTTATAGCCGTTGTGGAACTTCTGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAAACCAGTGAAGTTTCTGGATTTCATAACTGGCTGCAGTTTTACCTTGAAGAAACAAAGGGGGCAGTTGATTATCAAGGCTATATTTTCCCCCGTCGACGGGGTGAAGTTCCTGACTCTGAAACCCAGCTTTTAACAATTCAGTTTGAATGGAATGGTGTTCTAAAGTCTGTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTTTGCTGGTACGGAAGATAACCACATTCAGATTGGTCCATATCCAGTTAATATCAAGTGCTATCGTTTTGGGGATCGAATTGGATCTGTTTTCCCCATTGCAGATTCATGA 1329 0.4281 MDGLIKGLIDVALGGNNNHDQQDNDRDERSRSSWSEVVSGDQEKDSDHHPQKEEVETWQDNSNRHSPRPHKEQYRPQTQRQEYESETFNSPNRHNKEQYRPQQQEYESETFNTSNRPNKSDEGNNDGWQTVGKPSKQTHKVPKDNWNSYKRPADEQQYSNEVEVGSRVEPSEDELADLSRACEKLWDLDLNRLTPGKDYEIDCGEGKKVYQKDDMAQGSLFTWVSDDVFRKPTYARFLSLLDNYNPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKFLASKRITSGSSQDFKRLLTSLWFDLYSRCGTSGSSSAFEHVFVGEIKQTSEVSGFHNWLQFYLEETKGAVDYQGYIFPRRRGEVPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFAGTEDNHIQIGPYPVNIKCYRFGDRIGSVFPIADS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3521 442 CDD XendoU 174 438 IPR018998 GO:0004521
Mtr4g3521 442 Pfam Endoribonuclease XendoU 177 438 IPR018998 GO:0004521
Mtr4g3521 442 PANTHER PLACENTAL PROTEIN 11-RELATED 122 441 IPR039787 GO:0004521
Mtr4g3521 442 MobiDBLite consensus disorder prediction 20 79 - -
Mtr4g3521 442 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 174 442 IPR018998 GO:0004521
Mtr4g3521 442 SUPERFAMILY EndoU-like 176 440 IPR037227 -
Mtr4g3521 442 MobiDBLite consensus disorder prediction 104 136 - -
Mtr4g3521 442 MobiDBLite consensus disorder prediction 87 103 - -
Mtr4g3521 442 MobiDBLite consensus disorder prediction 1 171 - -
Mtr4g3521 442 PANTHER - 122 441 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3521 K14648 - gmx:100813919 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3521 4 48956969 48962266 Mtr4g3521 4 48956969 48962266 ECH