Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3518 ATGGACTCATCAATAAAACTTTGTTACTTAGAACAAGACCACGGTTTAGCTTCCTTAAAAGACATGGATGTTGCAAGTTATCGTGGCAATAGTTTTGTTACAAAATCTATGATAACCATGGGTTATGCCAATAATACTAGTTTCAAGAACCTTTATGTTTCTTCACCTAGATCTGGAAGATTTTATGATACTAGATTTGAAGATCACCAACCTCACTTCCTTGAAGCTTGTTCTCTTTGTAACAAACCACTTGGTGGCAACAAAGATATCTTCATGTATAGGGGTGACACACCTTTTTGTAGTGAAGAGTGTAGGCAAGAACAAATAGAGATAGATGAATTGAAGGAGAAGAATATGAACCTTTCTTCATCTATGAAAGCTTTGAGGAATAAAGAGCATAGAAAATCTAATTCTTCAAACAAGATTCAAGGACAAGATTATTCCTTTCGTAAAGGGACAGCTATTGCAGCATAG 474 0.3523 MDSSIKLCYLEQDHGLASLKDMDVASYRGNSFVTKSMITMGYANNTSFKNLYVSSPRSGRFYDTRFEDHQPHFLEACSLCNKPLGGNKDIFMYRGDTPFCSEECRQEQIEIDELKEKNMNLSSSMKALRNKEHRKSNSSNKIQGQDYSFRKGTAIAA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3518 157 MobiDBLite consensus disorder prediction 122 157 - -
Mtr4g3518 157 Pfam zinc-finger of the FCS-type, C2-C2 65 114 IPR007650 -
Mtr4g3518 157 Coils Coil 104 131 - -
Mtr4g3518 157 ProSiteProfiles Zinc finger FLZ-type profile. 72 116 IPR007650 -
Mtr4g3518 157 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 46 156 IPR044533 -
Mtr4g3518 157 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 46 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3518 Mtr-Chr4 48895287 48896353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3518 - - aprc:113849917 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3518 4 48895287 48896353 Mtr4g3518 4 48895287 48896353 ECH