Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3508 ATGGACTCGTTGATCTCACTCGTTAACAGAATTCAACGCGCATGCACGCTTCTCGGTGACCACAACGCCGATTATGCTTCTCAGTCTCTCTGGGAGTCTCTTCCTTCCGTCGCCGTCGTCGGCGGTCAGAGTTCTGGAAAATCGTCGGTGTTAGAGAGTATCGTTGGACGTGATTTTCTTCCCCGTGGATCAGGGATTGTGACGCGGAGGCCGTTGGTACTGCAACTGCACAGAATAGAGGAAAGGTTACAAGAGTATGCTGAGTTTCTGCACTTGCCGAAGAAACGGTTTACTGATTTCTCTATGGTTCGAAAGGAAATTGAAGATGAAACTAATAGAGTGACTGGGAAATCAAACAAGATATCTCCTGTTCCTATTCATCTAAGCATCTACTCACCAAATGTTGTCAACTTAACACTGGTAGATCTGCCTGGTTTGACAAAGTTCGCTGTAGAGGGACAACCAGAAAGTATTGTTCAAGACATTGAAAGCTTGATCCACTCATATGTTGATAAGCCTAATTGCTTAATTTTGGCCATTACTCCAGCAAATCAAGATGTAGCGACATCTGATGCCATCAAGGTTTCCAGACAAGTTGACCCTGCTGGTGAACGAACATTTGGTGTGTTGACGAAGATTGATTTGATGGACAAAGGAACAAATGCTTTGGATGTCCTTGAAGGAAGATCATATCGACTTCGTAATCCTTGGGTGGGAATTGTAAACCGTTCTCAGGAAGATATTAATAAGAACGTAGATATGATTGCAGCTCGGCAGAGAGAGCGTGAATTTTTTGCCACCAATCCTGATTACGCACACTTGGCCAGCAAAATGGGCTCAGAATATCTTGCAAGGCTACTGTCAAAGCATCTAGAGTCTGTGATCAGAGCTCGCATTCCAGGGATTGCGTCTTTCATTACTAGAAGCGTTGATGACCTTGAAGCAGAGTTGGCTCACCTTGGTCGACCAGTTGCCATTGATGCTGGGGCCCAACTGTACACTATTCTAGAATTATGCCGTGCTTTTGATCGGGTGTTTAAGGAGCATTTAGATGGAGGGCGACCAGGTGGTGACAAAATTTATATAGTTTTCGATTATCAGCTTCCTGCTGCATTGAGAAAGATTCCACTGGACCGTCATTTATCGCTGCAAAATGTGAGAAACGTTATTTCTGAGGCAGATGGATACCAACCTCATCTAATTGCTCCCGAGCAAGGTTACCGACGCCTCCTAGAGAGCTCACTCAATTATTTTAAAGGTCCCGCTCAAGCATCTGTAGATGCTGTTCATTTTGTCCTGAAGGAACTCGTGAGAAAGTCAATTTCCGAAACAGAGGAATTGAAGCGCTTCCCAACTCTTCGATCTGAAATAGCAGTAGCAGCTATCGAGGCTTTAGAGAGGTTCCGTGAAGACGGAAAGAAGGCAACATTAAGACTAGTGGAAATGGAATCTTCATATATCACCGTTGATTTCTTCCGTAAACTCCCACAAGAAGTCAGCGACAGGGGAGGGAATCAGGCTTCCTCCTCTGCTGACGGACACTTCCAAAGGATTGGTTCAAACGTTTTATCTTACGTTGGGATGGTATCAGAAACATTGAGGAATACCATTCCAAAGGCTGTTGTTCATTGTCAAGTGAGGGAAGCTAAGCGATCTTTACTAGATCACTTTTACGCACAACTCAGCCAAAAAGAGGAATTGCAACTTGCTCATTTGCTGGATGAAGATTCTGTGTTGATGGAAAAGAGACAGCAATGTGCCAAGAGGCTGGATTTGTATAAGTCCGCGAGAGATGAGATTGATGCAGTTTGTTGGTCGGGATGA 1824 0.4452 MDSLISLVNRIQRACTLLGDHNADYASQSLWESLPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHRIEERLQEYAEFLHLPKKRFTDFSMVRKEIEDETNRVTGKSNKISPVPIHLSIYSPNVVNLTLVDLPGLTKFAVEGQPESIVQDIESLIHSYVDKPNCLILAITPANQDVATSDAIKVSRQVDPAGERTFGVLTKIDLMDKGTNALDVLEGRSYRLRNPWVGIVNRSQEDINKNVDMIAARQREREFFATNPDYAHLASKMGSEYLARLLSKHLESVIRARIPGIASFITRSVDDLEAELAHLGRPVAIDAGAQLYTILELCRAFDRVFKEHLDGGRPGGDKIYIVFDYQLPAALRKIPLDRHLSLQNVRNVISEADGYQPHLIAPEQGYRRLLESSLNYFKGPAQASVDAVHFVLKELVRKSISETEELKRFPTLRSEIAVAAIEALERFREDGKKATLRLVEMESSYITVDFFRKLPQEVSDRGGNQASSSADGHFQRIGSNVLSYVGMVSETLRNTIPKAVVHCQVREAKRSLLDHFYAQLSQKEELQLAHLLDEDSVLMEKRQQCAKRLDLYKSARDEIDAVCWSG* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3508 607 PRINTS Dynamin signature 34 52 IPR022812 -
Mtr4g3508 607 PRINTS Dynamin signature 59 76 IPR022812 -
Mtr4g3508 607 PRINTS Dynamin signature 132 149 IPR022812 -
Mtr4g3508 607 PRINTS Dynamin signature 182 200 IPR022812 -
Mtr4g3508 607 PRINTS Dynamin signature 201 217 IPR022812 -
Mtr4g3508 607 PRINTS Dynamin signature 224 243 IPR022812 -
Mtr4g3508 607 SMART GED_2 510 603 IPR003130 GO:0003924|GO:0005525
Mtr4g3508 607 Gene3D Dynamin, middle domain 333 583 - -
Mtr4g3508 607 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Mtr4g3508 607 CDD DLP_1 33 300 IPR001401 GO:0003924|GO:0005525
Mtr4g3508 607 Gene3D - 1 309 IPR027417 -
Mtr4g3508 607 Pfam Dynamin GTPase effector domain 513 603 IPR003130 GO:0003924|GO:0005525
Mtr4g3508 607 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 606 - -
Mtr4g3508 607 Pfam Dynamin central region 221 489 IPR000375 -
Mtr4g3508 607 Pfam Dynamin family 37 213 IPR045063 -
Mtr4g3508 607 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 300 IPR030381 GO:0005525
Mtr4g3508 607 PANTHER DYNAMIN 2 606 IPR022812 -
Mtr4g3508 607 ProSiteProfiles GED domain profile. 515 607 IPR020850 -
Mtr4g3508 607 SMART dynamin_3 1 251 IPR001401 GO:0003924|GO:0005525
Mtr4g3508 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3508 Mtr-Chr4 48780179 48785810 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3508 - - gmx:100818169 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3508 4 48780179 48785810 Mtr4g3508 4 48780179 48785810 ECH