Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3186 ATGCTATCTGGGCTCACACTGCAAACAATGGAAGTTACATCCAAATACAGAAGATACAAAAAGGGTGATTTATCTCCTACAAACACTACTGTGCATGTTTGCAATGCTTGCAGAAACATTTGCAGTTCTCATCACCAAAGTGGAGAAACAAAAGCACCCTGCAGAGGTTGTTGTTGCTTTCTATGTAATATTTGTAATTCAGCTTTGGAACATGGGAAATCAAGGGAAAACTGCCTGGTTGGTTCGGTGAAAAAAATCGGAAGCAAATTGTTCAAACTTGACAATTCAAATAAAAATGGAAATTTTCTTGGTTGGTCATCATCACCATCTCCTTCAATTGCATTTCCCTCATCTTTTCCAAGAAGATATAACAAGCGTGCCGTTCTCTGTGGAGTTTCTTATTCAACAAGAAAATTCAGGCTTAAGGGAACCATTAATGATACCAATAACATGAGAGAGCTTCTGATTAAGAATTTTAAGTTTCCAAATCAATGCATAAGAGTCCTTACAGAACAAGAGCAGAATGTCGATTTAATACCAACGAAACACAACATATTGGAGTCCTTAAGGTGGCTTGTGAAAGACTGTGAGGCAGGAGACTCTTTAGTATTTTACTTTTCAGGACATGGCTTGCAACAACCAGATTTCAAAGAAGATGAAATTGATGGGTTTGATGAGACTCTTTGTCCTGTTGATTTCATTAAAGAAGGAATGATTTCCGACAATGAAATAAATTCTACCATTGTTTGGCCACTCAAAAAAGGTGTCACACTTCATGCTATTGTTGATGCTTGTCATAGTGGAACAATTCTTGATCTTTTACATGTCTACAACTATCAAAGTGGCATTTGGGAGGATAACAAGCCCCCTTCTAGAGACCCTATAAGAAAACATACAAGTGGTGGATTGGCTATTTGTCTCAGTGCTTGTGAGGATAACCAAATGGCTGCTGATAGTGCAGTTTTTGGTGGAAAGGGAATGAATGGTGTTCTGACTTATCTATTCACAAAAACAATTAGAGAATACCCTCGTGGAATTACTTATAGAGGTCTACTGGCAAAAATGCATGAAGAAATTAAAAAAATTAACAGAAACAGATCATTCAGTTACCGCATCTTGCACCGTAAAATTATCGCACAGGATCCTCTTTTATCATCATCTGAGAGATTTGATGTTTCTACAACAATATTCACATTGTGA 1200 0.3717 MLSGLTLQTMEVTSKYRRYKKGDLSPTNTTVHVCNACRNICSSHHQSGETKAPCRGCCCFLCNICNSALEHGKSRENCLVGSVKKIGSKLFKLDNSNKNGNFLGWSSSPSPSIAFPSSFPRRYNKRAVLCGVSYSTRKFRLKGTINDTNNMRELLIKNFKFPNQCIRVLTEQEQNVDLIPTKHNILESLRWLVKDCEAGDSLVFYFSGHGLQQPDFKEDEIDGFDETLCPVDFIKEGMISDNEINSTIVWPLKKGVTLHAIVDACHSGTILDLLHVYNYQSGIWEDNKPPSRDPIRKHTSGGLAICLSACEDNQMAADSAVFGGKGMNGVLTYLFTKTIREYPRGITYRGLLAKMHEEIKKINRNRSFSYRILHRKIIAQDPLLSSSERFDVSTTIFTL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3186 399 Gene3D - 87 399 - -
Mtr4g3186 399 SUPERFAMILY Caspase-like 128 363 IPR029030 -
Mtr4g3186 399 PANTHER METACASPASE-4 33 399 - -
Mtr4g3186 399 Pfam Caspase domain 125 390 - -
Mtr4g3186 399 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 33 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3186 Mtr-Chr4 45314542 45317383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3186 K22684 - gmx:100796640 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3186 4 45314542 45317383 Mtr4g3186 4 45314542 45317383 ECH
Mtr4g3186 4 45314542 45317383 Mtr2g0171 2 1727438 1730586 PCT