Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3177 ATGGCTGCCACGTGCTGTAACCTCACACATGCTTCTCCTTTCCTTAATCATCAACTCTTCTACTTCCAAAGGTACCATTTAGTTTCCAAAAGATCAAAATGTAATACCAGTATGGAAAAAGTTTTACATAGGAGATTTCAAGTTCAAAGAAGGGATCATCACTACATACATGTGCGTTATGCTGGAGGAGCTGAATTATCCTCTTCTTCTAGTTCCAGCATTGAAAAAAATGTTGGAGAGGAAATTCAAGAGGATATTTCAATGGAAACATTGATTTGGAGGGCTATCAAGTTGCCTATTTACTCTGTTGCTTTGGTCCCTCTCACTGTAGGTAGTGCAGCAGCTTATTTACAGACAGGCATCTTCTCAGCTAAATGCTATTTTGTTCTATTGGCTTCTTCAATCCTTGTTATTACCTGGCTCAACTTAAGCAATGATGTTTATGATTTTGACACTGGAGTTGACAAGAACAAAAAGGAATCAGTTGTAAACCTGGTTGGAAGCCGTACAGGAATCTTTATTGTTGCCTACTTATGCCTTGCTCTTGGCTTCGTCGGGCTGACTTGGGCTGCTGTTGAGGCCGGAAACATTCGTTCAGTGTTATTTCTTACTTGCGCAATTTTTTGTGGCTATATATATCAGTGTCCACCATTTCGGTTAAGCTATCAGGGACTGGGAGAGCCTTTGTGTTTTGCAGCATTTGGTCCTTTTGCCACTGCTGCTTTTTATTTAGTACAAGGCAGTGCAAGTGTGACGAACCATTTCCCCTTGAGTGGAACAGTTCTTTCAGCATCAGTCCTCGTTGGCTTTACAACATCTCTTATCCTTTTTTGCAGTCATTTTCATCAGGTAGATGGAGACGAAGAAGTTGGAAAATTATCGCCTTTGGTTAGACTTGGCACTGAAAGAGGTGCAGAGGTAGTGAAAGCAGCAGTCTTGTCGCTCTATGCTCTTTTGGTTGCTTTTGGTCTAAGCAAGGCACTTCCTCTCACTTGTATTTTCCTTTGTGCATTGACATTACCGATTGGAAACCTGGTAATTAAATTTGTCCAAGACAATCACAAGGACAAAGATAAGATTTTCATGGCCAAGTACTTTTGTGTGAGGTTGCATGCTTTATTTGGTGCTGCACTGGCTTTTGGATTGGTATTGGCAAGAATGGTTAATTCAAAGCTACTACTGCAATGA 1188 0.4082 MAATCCNLTHASPFLNHQLFYFQRYHLVSKRSKCNTSMEKVLHRRFQVQRRDHHYIHVRYAGGAELSSSSSSSIEKNVGEEIQEDISMETLIWRAIKLPIYSVALVPLTVGSAAAYLQTGIFSAKCYFVLLASSILVITWLNLSNDVYDFDTGVDKNKKESVVNLVGSRTGIFIVAYLCLALGFVGLTWAAVEAGNIRSVLFLTCAIFCGYIYQCPPFRLSYQGLGEPLCFAAFGPFATAAFYLVQGSASVTNHFPLSGTVLSASVLVGFTTSLILFCSHFHQVDGDEEVGKLSPLVRLGTERGAEVVKAAVLSLYALLVAFGLSKALPLTCIFLCALTLPIGNLVIKFVQDNHKDKDKIFMAKYFCVRLHALFGAALAFGLVLARMVNSKLLLQ* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3177 395 CDD PT_UbiA_UBIAD1 93 381 IPR026046 GO:0004659
Mtr4g3177 395 Hamap 2-carboxy-1,4-naphthoquinone phytyltransferase [menA]. 67 382 IPR011937 GO:0004659|GO:0016021|GO:0042372
Mtr4g3177 395 Pfam UbiA prenyltransferase family 105 364 IPR000537 GO:0016021|GO:0016765
Mtr4g3177 395 TIGRFAM menA_cyano-plnt: 1,4-dihydroxy-2-naphthoate phytyltransferase 93 383 IPR011937 GO:0004659|GO:0016021|GO:0042372
Mtr4g3177 395 PANTHER UBIA PRENYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 71 387 - -
Mtr4g3177 395 PANTHER 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE 71 387 IPR026046 GO:0004659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3177 K23094 - gmx:100790629 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3177 4 45203964 45207404 Mtr4g3177 4 45203964 45207404 ECH