Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3114 ATGGCTTCATCAGAGATCGAGGTAGTTTCATCGGAACCGTCCAAGCCCCAAGAACATCAGCTACCTCCCATACTCGACGTTTTCACTGCTTCCATCCATGGTGACCTTCAAAAATTGAGATTTTTCGTTGAACAAGAAGGTGCCTCCGTTTCTAATCCCGATTTTAATGGCTATTATGCTCTTCAATGGGCTTCTCTCAATAACTTCCACCACATTGTTCTCTATCTCATTCAGCATGGTGCCGATGTCAATGCTAAAGACCTCATGCTACAAACGGCTTTACATTGGGCGGCAGTTCGTGGTGCAATGGCAGCTGCTGATGTGCTCTTGGAGAATGGTGCTCGGGTTGAAGCTGCTGATATAAATGGATACAGGGCAGTTCATGTTGCTGCACAATATGGACAGACAGCTTTCCTAAATCACATTGTTGCAAGATACCATGCTGATTTTGATGTGCCTGATAATGATGGAAGGAGTCCTCTACATTGGGCTGCGTATAAGGGATTTGCGGATACAATAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTGCTACTCCATTGCATTGGGCAGCATTAAGAGGACATTCAGAGGCATGTGCTGTGCTTGTGCATGCTGGGACAAAGGAAGAATTGACGGTGAAGGACAATACAGGATTCACTCCTGTACAGCTTGCATATGATAAAGGTCATCAAAATGTCGCCCCTTTCCTTTCTAATCAACAACGGGCTCATAGCAAGCACTGGAGAGGCAAACTTTATTGTGGGTTGGTGACAGATATTGGTTATGCTCCCATTTTATTGTGTGTTATAGTCTTTCTCTCGTTCCTCTTCATCAATTCAGTTGTTGCAGCTCCCAACCTTAAAAAGATTACCGCTGTTGTTGGATTTTGGTCATGGATAGCTCTCTCTTCATCTGTTGGTTCCTTGATTATGTTTTATAGGTGTAGTAGAGATCCAGGGTATATAAGACGGCCAGGAGACTTGGGTACTCTGAACGAAACAGAGGATCCGTTGCTGAATATTGAGCTGAATAGTTCATCCGTTTGGACAGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCTACTTGTAAGCGTTGTGTAGAACAGTTCGACCACCATTGTCCATGGATATCTAATTGTGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCTTGGGAACTATTACTTCTTCTGTTAGTGCCGTCATTGCAGTTCACAGAATTTGGACATCAATACCAGCAGTACCAGCAGGAGAAACATGGATCCATCAGGTGTTAGTAAGACATCCGGGTCTTGTTGCATTTTTGGTGATGGATGCTGTTGTCGTTGTTGCAACTACAACTTTGACAGTAACACAGGCTTCCATGATAGCACGAAATGTGACCACAAATGAACTAGCCAATTCCACACGGTATGAGTATCTTCGTGGTCCTGATGGGCGGTTCAGAAACCCATATAATCATGGTTGGTGGAAGAATTGTGCTGATTTTCTTTTGCTGGGTCACACAGATGACGATGCTATTGCTTGGCCTCCATTACAGCAGGTGGCTACTTAG 1620 0.437 MASSEIEVVSSEPSKPQEHQLPPILDVFTASIHGDLQKLRFFVEQEGASVSNPDFNGYYALQWASLNNFHHIVLYLIQHGADVNAKDLMLQTALHWAAVRGAMAAADVLLENGARVEAADINGYRAVHVAAQYGQTAFLNHIVARYHADFDVPDNDGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGATPLHWAALRGHSEACAVLVHAGTKEELTVKDNTGFTPVQLAYDKGHQNVAPFLSNQQRAHSKHWRGKLYCGLVTDIGYAPILLCVIVFLSFLFINSVVAAPNLKKITAVVGFWSWIALSSSVGSLIMFYRCSRDPGYIRRPGDLGTLNETEDPLLNIELNSSSVWTGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTITSSVSAVIAVHRIWTSIPAVPAGETWIHQVLVRHPGLVAFLVMDAVVVVATTTLTVTQASMIARNVTTNELANSTRYEYLRGPDGRFRNPYNHGWWKNCADFLLLGHTDDDAIAWPPLQQVAT* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3114 539 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Mtr4g3114 539 ProSiteProfiles DHHC domain profile. 362 412 - -
Mtr4g3114 539 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 526 - -
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat region circular profile. 156 182 - -
Mtr4g3114 539 PANTHER - 3 526 - -
Mtr4g3114 539 Gene3D - 20 94 IPR036770 -
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Mtr4g3114 539 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Mtr4g3114 539 Pfam Ankyrin repeats (3 copies) 128 214 IPR002110 GO:0005515
Mtr4g3114 539 Pfam Ankyrin repeats (3 copies) 30 119 IPR002110 GO:0005515
Mtr4g3114 539 MobiDBLite consensus disorder prediction 1 17 - -
Mtr4g3114 539 Gene3D - 95 257 IPR036770 -
Mtr4g3114 539 SMART ANK_2a 156 185 IPR002110 GO:0005515
Mtr4g3114 539 SMART ANK_2a 56 85 IPR002110 GO:0005515
Mtr4g3114 539 SMART ANK_2a 224 255 IPR002110 GO:0005515
Mtr4g3114 539 SMART ANK_2a 89 118 IPR002110 GO:0005515
Mtr4g3114 539 SMART ANK_2a 189 220 IPR002110 GO:0005515
Mtr4g3114 539 SMART ANK_2a 122 152 IPR002110 GO:0005515
Mtr4g3114 539 Pfam DHHC palmitoyltransferase 362 489 IPR001594 GO:0016409
Mtr4g3114 539 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3114 Mtr-Chr4 44703046 44710356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3114 87 288 Miscellaneous Gene Families AT2G31820 24.490 1.09e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3114 K20032 - gmx:100807263 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3114 4 44703046 44710356 Mtr4g3114 4 44703046 44710356 ECH