Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3108 ATGGAAGACCACAATTTTGTTGTTGGTCAAGAATTCCCTGATGTGAAAGCATTTCGGAATGCTATTAAAGAAGCTGCTATTGCACAACATTTTGAGCTTCGTATTATTAAAAGTGACTTGATTCGATACTTTGCTAAGTGTGCCTCTGAGGGCTGTCCATGGCGGATTCGTGCTGTCAAGCTCCCCAATGCTTCAACGTTTACCATAAGAAGTCTTGAAGGGACTCATACTTGTGGGAGAAATGCACTCAATGGACACCACCAGGCTTCTGTTGATTGGATTGTGAGTTTCATTGAAGAAAGGTTACGTGATAACATCAATTATAAACCAAAAGATATTTTACATGACATCCATAAGCAATATGGTATAACTATACCATATAAGCAAGCTTGGCGTGCAAAGGAACGGGGCCTTGCCGCAATATATGGCTCTTCCGAAGAAGGATTTTACCTACTTCCTTCATTCTGTGAAGAAATAAAGAAAACAAATCCTGGAAGTGTTGCAGAGGTATTTACCACTGGTGCAGATAGCCGCTTTCAGAGACTCTTTATTTCCTTTTACGCATCAATTCATGGTTTTGTTAATGGCTGTTTGCCCATTGTTGCTCTTGGTGGAATCCAGCTGAAAAGCAAATACCTTAGCACATTTCTTTCAGCAACTTCTTTTGATGCTGATGGTGGGTTGTTTCCTCTTGCTTTCGCTGTTGTCGATGTAGAAAATGATGAAAGCTGGACATGGTTCCTGTCTGAGTTGCATAATGCACTAGAGGTGAATACCGAGTGCATGCCACAGATTATATTTTTATCAGATGGGCAAAAGGGTATTGTGGATGCAATAAGAAGGAAGTTCCCAAGATCTTCTCATGCATTCTGCATGCGCCACTTAAGTGAAAATATTGGCAAAGAGTTCAAGAACTCTAGGCTTATCCATCTTCTATGGAGTGCTGCATATGCTACTACAATTAACGCATTCAGAGAAAAAATGGCTGAAATAGAGGAGGTATCTCCCAATGCCAGCATGTGGTTACAACATTTTCATCCTTCCCAATGGGCCCTAGTATATTTTGAAGGGACAAGATATGGTCATTTATCCTCTAATATCGAAGAATTCAATAAATGGATTCTTGAAGCCCAGGAGTTGCCAATTATCCAGGTGATTGAGCGGATTCAAAGCAAACTTAAAACTGAGTTTGATGACAGGCGTTTGAAAAGCAGTTCGTGGTGTTCTGTGCTTACTCCATCTTCAGAGAGACGAATGGTTGAAGCCATTAATCGTGCATCCACATATCAAGTGCTTAAATCAGACGAGGTAGAGTTTGAGGTTATTTCAGCTGATCGATCTGATATCGTAAATATTGGCAGCCACAGCTGTTCCTGCCGTGATTGGCAACTGTATGGGATACCATGTTCCCACGCTGTTGCAGCCCTTATCTCATCTCGTAAGGATGTCTACGCATACACTGCAAAGTGTTTTACTGTTGCAAGTTACAGGGATACGTATGCAGAGGTGTTACACCCTGTCCCTGGAAAACTTGAATGGAGAACCGATGAATCTGCTTTGGATAATGATATCGCAGTTGTGCGGCCACCGAAATTTCGCCGACCTCCAGGAAGACCGGAAAAGAAACGAATTTGTGTGGAGGACCATAATCGTGACAAACATACAGTGCATTGCAGTCGGTGTAATCAAACTGGGCATTACAAGACAACTTGCAAAGCAGAGATGATTAGTAGTATAGAACAGTTTTAG 1749 0.4168 MEDHNFVVGQEFPDVKAFRNAIKEAAIAQHFELRIIKSDLIRYFAKCASEGCPWRIRAVKLPNASTFTIRSLEGTHTCGRNALNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGFYLLPSFCEEIKKTNPGSVAEVFTTGADSRFQRLFISFYASIHGFVNGCLPIVALGGIQLKSKYLSTFLSATSFDADGGLFPLAFAVVDVENDESWTWFLSELHNALEVNTECMPQIIFLSDGQKGIVDAIRRKFPRSSHAFCMRHLSENIGKEFKNSRLIHLLWSAAYATTINAFREKMAEIEEVSPNASMWLQHFHPSQWALVYFEGTRYGHLSSNIEEFNKWILEAQELPIIQVIERIQSKLKTEFDDRRLKSSSWCSVLTPSSERRMVEAINRASTYQVLKSDEVEFEVISADRSDIVNIGSHSCSCRDWQLYGIPCSHAVAALISSRKDVYAYTAKCFTVASYRDTYAEVLHPVPGKLEWRTDESALDNDIAVVRPPKFRRPPGRPEKKRICVEDHNRDKHTVHCSRCNQTGHYKTTCKAEMISSIEQF* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3108 582 ProSiteProfiles Zinc finger SWIM-type profile. 439 480 IPR007527 GO:0008270
Mtr4g3108 582 Pfam MULE transposase domain 208 298 IPR018289 -
Mtr4g3108 582 Pfam MuDR family transposase 5 69 IPR004332 -
Mtr4g3108 582 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 573 - -
Mtr4g3108 582 PANTHER OS01G0334000 PROTEIN 1 573 - -
Mtr4g3108 582 SMART 26again6 455 482 IPR006564 GO:0008270
Mtr4g3108 582 Pfam SWIM zinc finger 429 478 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3108 Mtr-Chr4 44658676 44662972 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3108 - - gmx:100800865 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3108 4 44658676 44662972 Mtr4g3108 4 44658676 44662972 ECH