Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3106 ATGGCGGTGGAATACACTTGCTGCGAATCGGAGTTCTTCATCCACATATTGGTTATCATCTTCTTGGTAGTCTTCGCTGGTTTAATGTCCGGACTCACCTTAGGTCTCATGTCTCTCAGTCTCGTTGATCTTGAAGTTCTTGCTAAGTCTGGTACTCCGAACGATCGTAAACACGCCGTCAAGATATTACCTGTTGTGAGAAATCAGCATTTATTGCTTTGTACTTTGCTGATTTGCAATGCCGCCGCCATGGAGGCACTTCCTATTTTTCTTGATAGTCTTGTTACTGCTTGGGGTGCTATTCTGATTTCAGTCACGTTGATTCTTCTCTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGATATGGTTTGGCCATTGGTGCATCAGTCACTCCTTTTGTCCGCGTGCTTGTATGGATATGTTATCCAGTTGCTTTTCCAATTAGCAAGTTGTTGGACTATTTGCTGGGTCATCGAAATGAAGCCCTTTTCCGCAGAGCCGAGTTGAAAACACTAGTAGATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACAATAATTGCTGGGGCACTTGAACTCAGTGAGAAGACAGCCAGTGATGCTATGACTCCTATATCTGAAACATTTGCTATTGATATTAATTCGAAGCTTGATAGGGAACTGATGACTGAAATATTGGAGAAAGGACATAGCAGAGTCCCAGTCTATTATGAGCAGTCTACTAACATTATTGGACTAATACTGATCAAGAACTTGTTGACTATTCATCCAGAAGATGAATCACCTGTGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCGCTGTATGACATTTTGAATGAGTTTCAGAAGGGGCATAGTCACATGGCCGTTGTTGTACGACAATGCGATAAAACCAAGCAACCATCTTCCAAAAATGATTCAAATGATTCTGTGAAAGAGGTGAAGGTGGATATTGATGGTGAAAAGCCTCTCCAAGAGAAAGTCTTGAAACCCAAGATACCAATCCAAAAGTGGAAAAGCTTTCCAAATACTAACAAGTCGAATAGGGGTGGTTCTCGGAGCAGAAAATGGTCTAAAAATATGTACTCAGATATTTTAGAGATAGATGGTAGTCCCCTTCCAAATATCCCTGAAGAAGAAGAAGCTGTTGGAATAATTACCATGGAAGATGTTATTGAAGAGCTTTTACAGGAGGAGATATTTGATGAGACAGATCATCATTTTGAAGACTCATGA 1278 0.4124 MAVEYTCCESEFFIHILVIIFLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPNDRKHAVKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKNDSNDSVKEVKVDIDGEKPLQEKVLKPKIPIQKWKSFPNTNKSNRGGSRSRKWSKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3106 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Mtr4g3106 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Mtr4g3106 425 Gene3D - 380 417 IPR046342 -
Mtr4g3106 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Mtr4g3106 425 Gene3D - 191 326 IPR046342 -
Mtr4g3106 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Mtr4g3106 425 MobiDBLite consensus disorder prediction 313 331 - -
Mtr4g3106 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Mtr4g3106 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Mtr4g3106 425 MobiDBLite consensus disorder prediction 310 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3106 Mtr-Chr4 44643268 44648560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3106 K16302 - gmx:100801937 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3106 4 44643268 44648560 Mtr4g3106 4 44643268 44648560 ECH
Mtr4g3106 4 44643268 44648560 Mtr2g0236 2 2432279 2435436 PCT