Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3101 ATGAAGCCCTCAAATATTCTCGTAATCTTAACCATTTTCTCTATGTGCTGTTTCCTTTGCTTGGCACACAACGCCCCTCAAGACTACCTAGACGTGCACAACAAGGCTCGTGCCGAGGTTGGTGTTGGCCCACTCGTGTGGAACGAAACCCTTGCCTCCTATGCCATGAACTATGCTAAATCGAAGCACGAAACCTGCGAAATGGTGCACTCCCAAGGGCCTTATGGCGAGAACCTTGCGGAGGGTTCTGACCCCCAAATGAATGCCGCTGATGCTGTGAAATTATGGGTGGATGAGAAGGCCTTCTATGACTATGGTACCAACGCGTGTGTTAAAGATGAGTGCAGACATTATACACAAGTGGTTTGGAGCAATACCAAGCAGCTTGGTTGTGCCAGAGAAAGTTGTAAGAATGGATGGACATTTTTCATTTGTAGCTACTACCCACCAGGAAATTATGTCGGCGATAAACCTTACTAG 480 0.4729 MKPSNILVILTIFSMCCFLCLAHNAPQDYLDVHNKARAEVGVGPLVWNETLASYAMNYAKSKHETCEMVHSQGPYGENLAEGSDPQMNAADAVKLWVDEKAFYDYGTNACVKDECRHYTQVVWSNTKQLGCARESCKNGWTFFICSYYPPGNYVGDKPY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3101 159 CDD CAP_PR-1 26 159 - -
Mtr4g3101 159 ProSitePatterns CRISP family signature 1. 116 126 IPR018244 GO:0005576
Mtr4g3101 159 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Mtr4g3101 159 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
Mtr4g3101 159 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Mtr4g3101 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Mtr4g3101 159 Gene3D CAP 24 159 IPR035940 -
Mtr4g3101 159 SMART SCP_3 24 155 IPR014044 -
Mtr4g3101 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 11 159 IPR001283 -
Mtr4g3101 159 Pfam Cysteine-rich secretory protein family 30 147 IPR014044 -
Mtr4g3101 159 PANTHER PATHOGENESIS-RELATED PROTEIN 1 11 159 - -
Mtr4g3101 159 SUPERFAMILY PR-1-like 23 159 IPR035940 -
Mtr4g3101 159 ProSitePatterns CRISP family signature 2. 142 153 IPR018244 GO:0005576
Mtr4g3101 159 PRINTS Venom allergen 5 signature 45 63 IPR002413 -
Mtr4g3101 159 PRINTS Venom allergen 5 signature 90 105 IPR002413 -
Mtr4g3101 159 PRINTS Venom allergen 5 signature 114 133 IPR002413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3101 Mtr-Chr4 44601940 44602536 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3101 K13449 - oeu:111401542 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3101 4 44601940 44602536 Mtr4g3101 4 44601940 44602536 ECH
Mtr4g3101 4 44601940 44602536 Mtr2g0243 2 2478912 2479418 PCT