Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2846 ATGAAGAAGAAACCCATGGAGAGTGTGAATGATCTGATCCAAGAGTTTAAGCTCCGCACTCTTTGGTGGGCTCTCTCTATTTTCGCCGTTTCTTATTTCCTCACTCATACAAGTAAATCGATGTGGATGAATGTGCCGATGTCAATTCTATTTGTTTGTGCTCTGCGCATTATTGTAAATAATGTGGAATTTCGTTGGAAGGTTAAACAACCTAGATCACATACATATTTATCACATTTGGAGAAAAAACAGTTGTCTTTGAATGATCCGCGTCTCTCTAGTGTACCTCCCCCGGTAAAGTGGAAGAGGAAAATTGATTCTCCTGTTGTGGAGGATGCAATGGCTGATTTCATTGATAAGATTTTGAAGGATTTCGTGGTTGATTTGTGGTACTCGGAGATTACTCCGGATAGGGAGTTTCCTGATCAGATACGCGCTATAATCATGGATGTTCTTGCTGAAATATCAGCAAGGGTTAAAGAGATAAATCTTGTCGACTTGTTGACAAGGGATTTAGTTGATTTAGTAGGCGATCACTTGGAACTTTTTAGAAGAAATCAAGCGGCTATAGGTGTCGACGTTATGAAAACATTATCTACAGAGGAGAGGGATGACAGATTGAAATTCCATTTGTTGAACTCTAAGGAGCTTCATCCAGCACTAAGATCTCCCGAGAGTGAGTACAAGGTTCTTCAGCGGCTAATGAGTGCACTTTTAGCTACAGTACTAAGACAACGTGAAGCACAGTGTCCCGTGATTCGCTCAATATCTCGGGAACTTTTGACTTGCTTGGTGATGCAACCTGTTATGAATTTGGCAAGCCCTGGGTTTATAAACGAGCTGATTGAAACACTTCTACTTCTCCTTAACGACAACGATAGTAAAAAGTGGATGGGTGGCGATCAGTCAACTAATGTAGCAAGTCATCATCATGGTAACTCTGTTGCTAATAGCGGCGGACATGACAATCTCACAGCCTCTAGTAAGCATCCACCTTTATACCAAGGAACTGAGATGACATTGGCTAAAATGAGCGACCGGGGAGAGACATCCTTACAAAATAATTCAGTCCATCAAAAATCTTCACAGCCCAAGCCTGCTGATTGGGCACAAATGTTGGAGGTTGCAACTCAGAGGAGAACTGAAATTCTTATGCCCGAGAATCTTGAGAACATGTGGGCAAAAGGAAGAAATTACAAAAGGAAAGAGAACAAAATTGTCAAAACTGGATCTCAGGATCTTCACACCAAGAGTTCTGCTACTGACCGTTCATTGCTGAATAGAAAAATGAACCAGGAAACGTTAGTGAGTAAACATGGAAAGCATGAAGCTGCTGAAGTGAAGTCTTCTCTACCTTCAACGCATGCCTTGACTTCGGATCCCCTACAAAGTGTTGCATCTACAAATATTTCAGAATCTTCGCAATACCCAGACAAGACGTCATCGTTCGAGGGAGAGCTTAGAGTTGATAAAATGAAGGGCACAAAGGATCTTGCTTCTGATGGGTATAAAAGTTCGTTAAAGAGGTCTAGCAGTGCTTCTGCCTTGGCAATCCACCTTAATCAAGAAGGTAGCTCCATTATTTCAGAGTTTTTCAACCCGGAATTTGAGAGGCGCGAAGGATTTCGGGGAAAGAGTTCTTCTGACATGATAGTTAGGAAAGAGGGGCAATTAGCTCCAAAGCTCCGGTGCCGGGTTGTGGGAGCATATTTTGAGAAAATTGCTTCCACGTCTTTTGCTGTCTACTCAATTGCAGTGACTGATGCACAGAATAGAACTTGGTTTGTAAAAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTTAAAGATATTCCAAATTACACATTGCATTTGCCTCCTAAAAGGATATTTTCCTCGAACACTGATGATGCCTTTGTACATCAACGCTGCGTTCAGCTTGATAAATATCTCCAGGATCTCCTGTCAATAGCTAATGTTGCTGAACAACATGAAGTATGGGACTTTTTTAGCGTTTCCTCAAAGAACTACTCTTTTGGGAAATCTTCTTCGGTGATGAAGACCTTGGCAGTAAATGTAGATGATGCTGTGGATGATATTGTACGCCAGTTCAAGGGGGTTTCAGATGGTTTAAGGCGAAAAGTTGGTGGATCACCATCCCTCCTCAATGAGGGACCTTCCACATCATTGTACTTGCCTTGGAATGCAGATGAATTGGATAAAAGTACCACACAGCAAAGTGCTACAACAAGTGTGTTAAGTTCTGATACTGAGGACGGTGATAGGAACAGTAATCTAGGCCATGATAATTTTGATAGAGAAGAAGTACAAGATAATGCATTGATTTTGAAAGGTTACCCATCACTGGTAACAGACTATACTGACGAGTCCAGCAACTTGGCTATTGATAGACAGCGTGATCTGTCGGAGGAAGCTAGGATTAGCAATGACGTTCCAACTACAAATTCCATTCTTACTCGCGATAATTTGGAGGATCCTGTTGGAGTGCCACCTGAGTGGTCCCCACCTAATGTTAGTGTCCCTCTTTTGAATTTGGTTGACAAGATATTTCAGCTTAAGAAAAGAGGTTGGATAAGGAGACAGGTGTTTTGGATGTCAAAACAGATATTACAGCTGGTGATGGAAGACGCTATTGATGATTGGCTCCTGATGCAGATTCACTGGCTTCGGAAAGAGGACACTGTTGCACAAGGGATTCGGTGGCTCCAAGATGTCCTCTGGCCTGGTGGTATGTTCTTTACAAGAGTAAGATTACCCCAAATAACAAATGGTGGCAGTGATGAAAAGCCTTCTCAAACAATAAGTGGATCTGGGGGGCGCAACATCACAAAACACGAATCTGGCTCTTTTGAGGAACAGCTTGAAGCTGCTCGTAGAGAAAGTGACATCAAGAAACTGCTCTTTGATGGTGCTCCAACAACTTTAGTCAGCTTGATCGGGCATAATCAGTACAGACGCTGTGCCAGAGATATATATTACTTCAGTCAGTCTCCTGTATGTATGAAGCAACTTGCCTATGCAATTCTGGAACTTCTACTTGTTTCCATCTTTCCTGAGATGAGGAATGTTGTGTTGAGTGTTCATGAGAATATGAACGTTCACCAAGCGCCGTGA 3120 0.4218 MKKKPMESVNDLIQEFKLRTLWWALSIFAVSYFLTHTSKSMWMNVPMSILFVCALRIIVNNVEFRWKVKQPRSHTYLSHLEKKQLSLNDPRLSSVPPPVKWKRKIDSPVVEDAMADFIDKILKDFVVDLWYSEITPDREFPDQIRAIIMDVLAEISARVKEINLVDLLTRDLVDLVGDHLELFRRNQAAIGVDVMKTLSTEERDDRLKFHLLNSKELHPALRSPESEYKVLQRLMSALLATVLRQREAQCPVIRSISRELLTCLVMQPVMNLASPGFINELIETLLLLLNDNDSKKWMGGDQSTNVASHHHGNSVANSGGHDNLTASSKHPPLYQGTEMTLAKMSDRGETSLQNNSVHQKSSQPKPADWAQMLEVATQRRTEILMPENLENMWAKGRNYKRKENKIVKTGSQDLHTKSSATDRSLLNRKMNQETLVSKHGKHEAAEVKSSLPSTHALTSDPLQSVASTNISESSQYPDKTSSFEGELRVDKMKGTKDLASDGYKSSLKRSSSASALAIHLNQEGSSIISEFFNPEFERREGFRGKSSSDMIVRKEGQLAPKLRCRVVGAYFEKIASTSFAVYSIAVTDAQNRTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSNTDDAFVHQRCVQLDKYLQDLLSIANVAEQHEVWDFFSVSSKNYSFGKSSSVMKTLAVNVDDAVDDIVRQFKGVSDGLRRKVGGSPSLLNEGPSTSLYLPWNADELDKSTTQQSATTSVLSSDTEDGDRNSNLGHDNFDREEVQDNALILKGYPSLVTDYTDESSNLAIDRQRDLSEEARISNDVPTTNSILTRDNLEDPVGVPPEWSPPNVSVPLLNLVDKIFQLKKRGWIRRQVFWMSKQILQLVMEDAIDDWLLMQIHWLRKEDTVAQGIRWLQDVLWPGGMFFTRVRLPQITNGGSDEKPSQTISGSGGRNITKHESGSFEEQLEAARRESDIKKLLFDGAPTTLVSLIGHNQYRRCARDIYYFSQSPVCMKQLAYAILELLLVSIFPEMRNVVLSVHENMNVHQAP* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2846 1039 PANTHER SORTING NEXIN CARBOXY-TERMINAL PROTEIN 2 1038 - -
Mtr4g2846 1039 Pfam PXA domain 107 284 IPR003114 -
Mtr4g2846 1039 Gene3D - 563 677 IPR036871 GO:0035091
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 347 366 - -
Mtr4g2846 1039 Pfam PX domain 590 667 IPR001683 GO:0035091
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 736 755 - -
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 299 333 - -
Mtr4g2846 1039 SMART PX_2 558 668 IPR001683 GO:0035091
Mtr4g2846 1039 Pfam Sorting nexin C terminal 859 1000 IPR013937 -
Mtr4g2846 1039 ProSiteProfiles PX domain profile. 560 672 IPR001683 GO:0035091
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 347 368 - -
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 437 483 - -
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 451 481 - -
Mtr4g2846 1039 SUPERFAMILY PX domain 562 669 IPR036871 GO:0035091
Mtr4g2846 1039 CDD PX_SNX19_like_plant 562 666 - -
Mtr4g2846 1039 ProSiteProfiles PXA domain profile. 107 290 IPR003114 -
Mtr4g2846 1039 SMART PXA_3 107 290 IPR003114 -
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 925 944 - -
Mtr4g2846 1039 MobiDBLite consensus disorder prediction 736 766 - -
Mtr4g2846 1039 PANTHER PX SERINE/THREONINE KINASE PXK 2 1038 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2846 Mtr-Chr4 42123709 42135317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2846 K17925 - gmx:100793613 1519.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2846 4 42123709 42135317 Mtr4g2846 4 42123709 42135317 ECH