Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2842 ATGGGAGAGGTAGACCCAACTTTCGTTCAAGAGCTAGAACACAGACCAAAACTCTCCCTCATAGAAGCCAAAGGTATTCCAGAAATTGATCTCTCTCCAATATTCCACAATGAAGTTCCAAATCCATCTGCTATTGAAAGCTTAGTCAAGGAGATTGGAAGTGCATGCAAAGCGTGGGGATTCTTTAAAGTCACAAACCATGGAGTCCCTTTGAGTCTCAGGCAGAGGCTTGATGAAGCTGCTAGATTGTTCTTTGCTCAGAGTTTGGAGGAGAAGAAGAAGGTTGCTAGAGATGAGATCATTCCAACTGGTTATTATGACACTGAACTCACCAAGAATGTTAGAGACATGAAAGAAGTGTTTGATTTTTACACCAATGACCCTTTCTTTCCTCTCACTCCTCATGAAAATGATGATCGAGTTATTCAATGGTGTAATCCAACACCTCCATACCCTTCAAACTTCAGAGTTATAATTGAAGAGTATATCGAAGAGATGGAAAAGCTGGCCCGTAAGTTATTGGAGCTTATAGCTTTAAGCTTAGGACTTGAAGCAAAGAGGTTTGAAGAATTCTTCAAGTATCAAACTAGCTTTATAAGATTCAACTACTATCCTCCATGCCCTTACCCTCACCTAGCTCTTGGCCTTGGAAGACACAAGGATGCTGGTGCCTTGACTATTCTTACCCTAAATGAGGTTGAAGGTCTTGAAGTGAAGCGTAAAACAGATCAACAACGGGTTCTTGTAAAACCTACCCGAGATCCGTATATTATCAACATTGGCGGTATTATTCAGGTTTGGAGTAATGATGCCAATGAGAGTGTGGAGCACAGAGCATTGGTGAACAAGGAGAAAGAAAGATTTTCTATTCCATTCTTTTTCAACCCAGGATATGATATTGAAATCAAGCCTTTGGAGGAGCTTATTAACGAGCAAAACCCTTCAAAATATAAGCCTTATAAATGGGGTAAATTTTATGTCCATAGAACAAACAGTAACTTCAAGAAACAAGAAGAGGAGAATCTTCAAATTTATCATTATATAAGCTACCTTAGAGAAAGATATTTTAATAAATGTATGACTTAG 1086 0.3886 MGEVDPTFVQELEHRPKLSLIEAKGIPEIDLSPIFHNEVPNPSAIESLVKEIGSACKAWGFFKVTNHGVPLSLRQRLDEAARLFFAQSLEEKKKVARDEIIPTGYYDTELTKNVRDMKEVFDFYTNDPFFPLTPHENDDRVIQWCNPTPPYPSNFRVIIEEYIEEMEKLARKLLELIALSLGLEAKRFEEFFKYQTSFIRFNYYPPCPYPHLALGLGRHKDAGALTILTLNEVEGLEVKRKTDQQRVLVKPTRDPYIINIGGIIQVWSNDANESVEHRALVNKEKERFSIPFFFNPGYDIEIKPLEELINEQNPSKYKPYKWGKFYVHRTNSNFKKQEEENLQIYHYISYLRERYFNKCMT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2842 361 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 341 - -
Mtr4g2842 361 PRINTS Isopenicillin N synthase signature 52 69 - -
Mtr4g2842 361 PRINTS Isopenicillin N synthase signature 219 240 - -
Mtr4g2842 361 PRINTS Isopenicillin N synthase signature 284 302 - -
Mtr4g2842 361 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 341 - -
Mtr4g2842 361 SUPERFAMILY Clavaminate synthase-like 4 335 - -
Mtr4g2842 361 Gene3D - 1 337 IPR027443 -
Mtr4g2842 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 296 IPR005123 -
Mtr4g2842 361 Pfam 2OG-Fe(II) oxygenase superfamily 198 296 IPR044861 -
Mtr4g2842 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 134 IPR026992 -
Mtr4g2842 361 Coils Coil 159 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2842 Mtr-Chr4 42098806 42101428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2842 26 318 Glycosyltransferase AT5G59530 31.333 3.90e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2842 - - gmx:100809985 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2842 4 42098806 42101428 Mtr4g2842 4 42098806 42101428 ECH