Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2840 ATGGGAGAAGTGGACCCTGCTTTTGTTCAAGAGCAAGAACACAGACCAAAACTCTCCATCATCGAAGCCAAAGGAATTCCCGAAATTGACCTCTCTCCAATTCTTCACCATGCAGTTCCAAATCCATCTGATATTGAAAACTTGGTGAAGGAGATTGGAAGTGCAAGCAAGGAGTGGGGTTTCTTTCAAGTCACAAACCATGGAGTCCCTTTGAGTCTAAGGCAGAGACTTGAGGAAGCTTCTAGATTGTTCTTTGCTCAGAGTTTGGAGGAGAAGAAGAAGGTTGCTAGAGATGAGGTCAATCCTACTGGTTATTATGATACAGAGCATACCAAAAATGTTAGAGACTGGAAAGAAGTGTTTGATTTTCTTTCTCAAGATCCTACATTAGTTCCTCGGAGTTCTGATGAACATGATGATGGTGTTATTCAATGGACTAATCAATCACCTCAATATCCTCCACAATTCAGGGCTATACTTGAAGAGTATATTCAAGAGGTGGAAAAGCTGGCATATAGGTTGCTGGAGCTAATAGCTCTAAGCTTAGGACTTGAAGCAAAGAGGTTTGAAGAATTCTTCAAGTATCAAACTAGCTTTATTAGATTCAACCACTATCCTCCATGCCCTTACCCTCACCTAGCACTTGGAGTTGGACGACACAAGGATGCTGGTGCCTTAACTATTCTTGCCCAAGATGAGGTTGGAGGACTTGAAGTGAAGCGTAAATCAGACCAACAATGGGTTCTTGTGAAACCTACCCCAGATGCTTACATTATCAATGTTGGTGATATCATTCAGGTTTGGAGCAATGATGCTTATGAAAGTGTGGAACACAGAGTGATGGTTAACTCTGAGAAAGAAAGGTTTTCAATCCCCTTCTTTTTCTTCCCTGCACACGACACTGTAGTCAAACCTCTCGAGGAGCTGACAAATGAGGAAAACCCTCCAAAATACAGACCATACAATTGGGGAAAGTTTCTTGTCAACAGAAAGAGTAGCAATTTCGAGAAGAAAAAGGTGGAGAACATTCAAATTTATCATTATAAGATAGCTTAA 1056 0.411 MGEVDPAFVQEQEHRPKLSIIEAKGIPEIDLSPILHHAVPNPSDIENLVKEIGSASKEWGFFQVTNHGVPLSLRQRLEEASRLFFAQSLEEKKKVARDEVNPTGYYDTEHTKNVRDWKEVFDFLSQDPTLVPRSSDEHDDGVIQWTNQSPQYPPQFRAILEEYIQEVEKLAYRLLELIALSLGLEAKRFEEFFKYQTSFIRFNHYPPCPYPHLALGVGRHKDAGALTILAQDEVGGLEVKRKSDQQWVLVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSEKERFSIPFFFFPAHDTVVKPLEELTNEENPPKYRPYNWGKFLVNRKSSNFEKKKVENIQIYHYKIA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2840 351 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 341 - -
Mtr4g2840 351 Pfam 2OG-Fe(II) oxygenase superfamily 199 297 IPR044861 -
Mtr4g2840 351 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 297 IPR005123 -
Mtr4g2840 351 Gene3D - 1 337 IPR027443 -
Mtr4g2840 351 SUPERFAMILY Clavaminate synthase-like 3 337 - -
Mtr4g2840 351 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 341 - -
Mtr4g2840 351 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 150 IPR026992 -
Mtr4g2840 351 PRINTS Isopenicillin N synthase signature 52 69 - -
Mtr4g2840 351 PRINTS Isopenicillin N synthase signature 220 241 - -
Mtr4g2840 351 PRINTS Isopenicillin N synthase signature 285 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2840 Mtr-Chr4 42090181 42093474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2840 26 319 Glycosyltransferase AT5G59530 35.880 1.61e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2840 - - gmx:100809985 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2840 4 42090181 42093474 Mtr4g2840 4 42090181 42093474 ECH