Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2839 ATGGGAGAATTGGACTTAGCATTTGTTCAAGAGCAAGAACACAGACCAAAACTATCCATCATTGAAGCCGAAGGAATTCCCGAAATTGACCTCTCACCAATATTCCACCATGAAGTTCAAGATCAATCTGCTATTGATAGCTTGGTGAAGAAGATTGGAAGTGCATGCAAGGAATGGGGCTTCTTTCAAGTTACAAACCATGAGGTCCCTTTGAGTATTAGGCAAAGACTTGATGAAGCTGCTAGATTGTTCTTTGCTCAAAGTTTGGAGGAGAAAATGAAGGTTGCCAGAGATGAGATCACACCAATTGGTTATTTTGATAAAGAGCACACCAAGAATGTAAGAAACTGGATAGAAGTGTTTGATTTTTTCGCCAGAGATCCCACTTTGGTTCCTCTGAATTGTGATGAAAATGATGATCAAGTTATTCAATGGTCTAATCCGTCCCCTAAGTATCCTCCAAAATTCAGGAATATAATTGAAGAGTATATTAAGGAGATGGAAAATTTGGCCTCTAAGTTGCTGGAGTTAATAGCTTTGAGCTTAGGGCTTGAAGCAATGAGGTTTGAAGAATTCTTCAAGGATACAACTAGCGTGTTTAGAATCAATCACTATCCTCCATGTCCTTCTCCTGAGCTAGCTCTTGGCATGGGAAGACACAAGGATGCTGGTGCCTTAACTATTCTTGCCCAAGATGAGGTTGCTGGTCTTGAAGTGAAGCATCAAATTTCACAAGAATGGGTTCTTGTGAAACCCACCCCAAATGCTTTCATCATCAACGTTGGTGATCTCACTCAGGTTTGGAGCAATGATGAGTATGAGAGTGTGGAACATAGAGTTATAGTCAACTTTGAGAAAGAAAGGTTTTCAATTGCCTTCGGTGTTTTCCCAGCACACTACATTGAAGTCAAGCCTTTGGATGAACTCATAAATGACGAAAACCCTCCAAAATATAAACCTTTCAATTGGGGCAAGTTTCTTATCAATAAAAAGAGCGACACTTTAAAAAAGAAAAATGTGGAGAATATCCAAATTCATCACTTTAAGATAGCTTAA 1056 0.392 MGELDLAFVQEQEHRPKLSIIEAEGIPEIDLSPIFHHEVQDQSAIDSLVKKIGSACKEWGFFQVTNHEVPLSIRQRLDEAARLFFAQSLEEKMKVARDEITPIGYFDKEHTKNVRNWIEVFDFFARDPTLVPLNCDENDDQVIQWSNPSPKYPPKFRNIIEEYIKEMENLASKLLELIALSLGLEAMRFEEFFKDTTSVFRINHYPPCPSPELALGMGRHKDAGALTILAQDEVAGLEVKHQISQEWVLVKPTPNAFIINVGDLTQVWSNDEYESVEHRVIVNFEKERFSIAFGVFPAHYIEVKPLDELINDENPPKYKPFNWGKFLINKKSDTLKKKNVENIQIHHFKIA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2839 351 Gene3D - 1 337 IPR027443 -
Mtr4g2839 351 Coils Coil 160 180 - -
Mtr4g2839 351 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 134 IPR026992 -
Mtr4g2839 351 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 297 IPR005123 -
Mtr4g2839 351 PRINTS Isopenicillin N synthase signature 52 69 - -
Mtr4g2839 351 PRINTS Isopenicillin N synthase signature 220 241 - -
Mtr4g2839 351 PRINTS Isopenicillin N synthase signature 285 303 - -
Mtr4g2839 351 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 341 - -
Mtr4g2839 351 SUPERFAMILY Clavaminate synthase-like 8 337 - -
Mtr4g2839 351 Pfam 2OG-Fe(II) oxygenase superfamily 197 296 IPR044861 -
Mtr4g2839 351 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2839 Mtr-Chr4 42084970 42087247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2839 26 319 Glycosyltransferase AT5G59530 33.444 9.49e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2839 - - gmx:100810518 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2839 4 42084970 42087247 Mtr4g2839 4 42084970 42087247 ECH