Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2838 ATGGGAGATATAGAAATAGAACCAAGTTCACATTTCATTCAATCTCCAGAACACAGACCAAAATCTTCCATAATCATTGCTGAAAGCATCCCTCTAATTGATCTCTCTCCCATAAACTACCAAGATGATGAAACCAACTCACTTTCCATCGAAAACTTGGTCAAAGAAATTGGTCAAGCATGTAAAGAATGGGGTTTCTTTCAAGTTATTAATCACAAAGTGCCTTTGGATAAACGTGAGAGAATTGAAGAATCTGCAAACAAATTTTTTGAACTTAGTTTGGAAGAGAAGGTTAAAGTGAGAAGAGATGAAGTTAACTTGCTTGGATATTTTGAAGCAGAGCATACAAAAAATGTTAGGGACTGGAAGGAAATTTATGATTTTAATGTGCAACAACCAACTTTTATACCACCTTCTTTTCAGTTCCAATGGGAAAATCGGTGGCCTAAGAATCCTCCTGAGTTTAGGGAAGCATGCCAAGAATATGCAGAAGAAGTAGAAAAACTAGCATATAAATTGATGGAACTTATTGCAATGAGTTTGGGTTTAGTACCAAATAGGTTCCGTGACTTCTTTATACATAACACCAGCAATATAAGACTCAACCATTATCCACCTTGTCCCTACCCTCATCTGGCTCTTGGTCTCGGACGTCACAAGGACACTGGTGTCTTAACTGTGCTTGCTCAAGATGATGTTGGTGGTTTGCAAGTTAAGAGAAAATCAGATGGAGAGTGGATTCAAGTTAAGCCCATTTTCAATTCCTTCATTATTAATGTTGGTGATATGATTCAGGTTTGGAGCAATGATGCTTATGAGAGTGTAGAGCACAGGGTAATGGTGAACTCTGAGAAGGATAGGTTTTCCATTCCGTTCTTTCTAAAACCAGCACTCTACACTGATGTTGAGCCCTTAGAAGAGTTGACAAACGATAAGAATCCTCCCAAATATTCAAAAATCAACTGGGGAAAATTTCGAACTGCCAGAATGCAAAATAATTTTATTAAATCCAATGTTGATAACCTCCAAATTTATCATTTCAAGCTTTCCTAG 1053 0.3723 MGDIEIEPSSHFIQSPEHRPKSSIIIAESIPLIDLSPINYQDDETNSLSIENLVKEIGQACKEWGFFQVINHKVPLDKRERIEESANKFFELSLEEKVKVRRDEVNLLGYFEAEHTKNVRDWKEIYDFNVQQPTFIPPSFQFQWENRWPKNPPEFREACQEYAEEVEKLAYKLMELIAMSLGLVPNRFRDFFIHNTSNIRLNHYPPCPYPHLALGLGRHKDTGVLTVLAQDDVGGLQVKRKSDGEWIQVKPIFNSFIINVGDMIQVWSNDAYESVEHRVMVNSEKDRFSIPFFLKPALYTDVEPLEELTNDKNPPKYSKINWGKFRTARMQNNFIKSNVDNLQIYHFKLS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2838 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 30 151 IPR026992 -
Mtr4g2838 350 Pfam 2OG-Fe(II) oxygenase superfamily 197 296 IPR044861 -
Mtr4g2838 350 SUPERFAMILY Clavaminate synthase-like 10 333 - -
Mtr4g2838 350 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 6 341 - -
Mtr4g2838 350 Gene3D - 4 336 IPR027443 -
Mtr4g2838 350 PRINTS Isopenicillin N synthase signature 57 74 - -
Mtr4g2838 350 PRINTS Isopenicillin N synthase signature 172 188 - -
Mtr4g2838 350 PRINTS Isopenicillin N synthase signature 284 302 - -
Mtr4g2838 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 296 IPR005123 -
Mtr4g2838 350 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 6 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2838 Mtr-Chr4 42078872 42080646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2838 30 317 Glycosyltransferase AT5G59530 33.559 3.38e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2838 - - gmx:100808372 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2838 4 42078872 42080646 Mtr4g2838 4 42078872 42080646 ECH