Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2825 ATGACTGAGTACTGGGTAAGTCAGGGAAACAAATGGTGCGATGTGTGCAAAATTTACATATCAAACAACCCTTCCAGCATCAGAAATCATGAGCTTGGCACAAGGCACAAGGAAAATGTTACAAAGCGGCTCGCGACTATGCGAAAAGAGAATGCTGCTAAAGATAAAGAACACAAAGAAACGGCTAATGCTCTTGTGCAAATCGAGGCGAAAGCAGAGCGTAGCTATCTAAAGGATAAGGCGAAGTTTGAGGAAGCTAGAGAATCACATGAATTGGATTCTCAAGGCGAATGGGAGTTTGACAGCAGTTCAGGCTATTACTACCATAAAACAAATGGATTTTGCTATGATCAAAAGTCGGGATTTTACTATTCTGATGCCATTGGCAAGTGGGTGACCCATGATGAAGCTTATGCCTCACCACACTTTGCATCAAATGCTGAGCGGAATGTACCATCTGGAAAAAAGGGAAAGATAACTTTACAATCCATATCAGATGATGAATACAAACCAAATAAACATCATAAAGGAACATTACCAGTTAGAGTGAATCCCATGAGAAATGCAAAAACCGCCGCCGCATCATCTCTTGCCGTCGGGAAGAGAAAGAGACCCAATGAAAAACCAAAGGTTATCTCCCAAGAAGAAAAAGAAGCTCTCAAGGCAAGAGAGGCTGCAAGGAAAAGAGTGGAACAGAGGGAGAAACCTTTGCTTGGGCTTTATAACAAGCCTTACTAA 738 0.4201 MTEYWVSQGNKWCDVCKIYISNNPSSIRNHELGTRHKENVTKRLATMRKENAAKDKEHKETANALVQIEAKAERSYLKDKAKFEEARESHELDSQGEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAERNVPSGKKGKITLQSISDDEYKPNKHHKGTLPVRVNPMRNAKTAAASSLAVGKRKRPNEKPKVISQEEKEALKAREAARKRVEQREKPLLGLYNKPY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2825 245 MobiDBLite consensus disorder prediction 191 217 - -
Mtr4g2825 245 SMART ZnF_U1_5 8 43 IPR003604 GO:0003676|GO:0008270
Mtr4g2825 245 Coils Coil 37 57 - -
Mtr4g2825 245 MobiDBLite consensus disorder prediction 201 217 - -
Mtr4g2825 245 Pfam U1 zinc finger 11 43 IPR013085 GO:0008270
Mtr4g2825 245 ProSiteProfiles Zinc finger matrin-type profile. 11 42 IPR000690 GO:0003676|GO:0005634|GO:0008270
Mtr4g2825 245 SUPERFAMILY beta-beta-alpha zinc fingers 12 54 IPR036236 -
Mtr4g2825 245 Pfam OCRE domain 96 145 IPR041591 -
Mtr4g2825 245 Gene3D Classic Zinc Finger 9 64 - -
Mtr4g2825 245 Coils Coil 213 233 - -
Mtr4g2825 245 PANTHER WW DOMAIN BINDING PROTEIN 4 1 150 IPR040023 GO:0000398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2825 K13220 - gmx:100776500 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2825 4 41913512 41918394 Mtr4g2825 4 41913512 41918394 ECH