LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g2811	ATGTTTCCGTGGAACATTGCAAAATCGGCCGAAGCCGTGTTCTCTCGTTGGGCTTTAAAGAGGGTTTGCAAATTCTTTTTGAAGAAGAAATTGGGGCAGTTTATTCTTGGTGAGATTGATCTTGATCAGCTCGATGTTCAATTTTCCGAAGGGACCATTCAGCTCACCGATCTCGCTCTTAATCTTGATTTCATCAACGCTAAGCTTGGTAAAACGGCATCTATAATGGTGAAAGAGGGATCAATTGGATACTTGTTGGTTAAAATGCCTTGGAGTGGTAAAGGCTGTGAGGTTGAAGTTAATGAGCTTGAACTTGTAGTTTCTCCGTGTATAGGTAGAACCGCAACTTCTGAAGATGAAGTTTGTTGTTCTGATGTTGGTAATGATAATTGTGAAATCAAATATAGCTCGAATAGGACGAAGAATGAACTAGGAGATGATGCTATGAAGTCAATTTCGATGGATGTTCATGAAGGTGTGAAAACTATTGCGAAGATGATAAAGTGGTTGCTTTCAAGCTTCCATGTGAAAATAACAAACGTGATTGTTGCGTTTGATCCGACTTTGGACAGCGATGAAGGAAAGGAAATGGATTGTCATCGTACTTTGGTTCTTCGTGTTTCTGAAATAGAATGCGGGACAAGTTTGTCTGAAGACACCGAGTCTAATGTTGATGTTCTTGGCATAAGCCAGTTGACAAACTTTGTGAAGTTTGATGGGGCAGTACTTGAAATTCTGAAAATAGATAATGAAAATAAGCATAAGTTGGAAGCAGGATGTGGTGAAGCTGGTTTGGGATCAAATAAATCCATGTGTCCGGTCATGACTGGGAAGCAAGGTGGATTTGGTGGAAATATAAAATTAACTATTCCTTGGAAGAATGGTTCCTTGGACATTTGCAAGGTGGATGCAGATGTTTGTGTTGATCCCGTAGTGTTAAGATTACAACCTAGCATAATTGAATGGCTATTGAAGTCTTGGGGAACTCTTAAAAATTTGAATAAGGATGTCAAAGGTTGCAAGGATCACAACTTAAGAGAACCTTCCCATTTAAATTCTGCTCTGTCATGCCCTTCATCAACTTCAATTTCTATTACCAATGCCACCGGCGATATGATAACTGGCCATCGCAGTTTGCCCGCCGATTGTGCCTCCTTGACCCAACCAGAAGATCCAGAATCCCTCGAAGCTGTGCTTCCTGCTGCTAATCTTATTTCCGACTGGGTGCCATTTTCTACTCATTTGAATCATAAAGATGGTATTCAAGAACCTGATTTTGGGGCGAGTGTGGACCAGTTTTTTGAATGTTTTGATGGAATGAGGAATTCTCAATCTGCTTTAGGGAGTAGCGGAATGTGGAATTGGACATGTTCGGTTTTCAGTGCTATTACCGCTGCATCCAGCCTTGCTTCTGGGTCTTTGCATATTCCCTCTGAACAGAAACACATGGAAACCAATCTCAGGGCTACTTTTTCTGGAGTATCTGTTGTTTTGTCCTTCTGTGATGACGAGCAGAGCCATTTTTATGAACATAAAATTGGTAGCACAGCTGGATCACAGATTGATTATCTTGGTGCAGAGTGCAATGAAATTGTTGTTGCCTTGAAGGTATGTCCACAAATGATAACTTTTGATGGCACGGTGAAGCATGTAGAGGTTGCTAATTTTTTGAACATTGGGAGTGATGCTGACAATCAAAGTGCTTTGGTTGGACACTTACAGACCAAGGTCCTTGATGCTCTCCCGCTGTCTACCTCTTACAATCTATATTCAGATTCATTAATTGGGCCTGTTGCAACAGACTTTCCATTTGGAAATAAGGATTGCTTATTGAAAGTTACATTGTTTAAAACTTCTGGTGTCACCAAGTGCAAATTTACAGTGCAATCTAGTTCTTCAGATGGTTGTGTGACTAGGCTGACATCATTCTCGCTCTACATGCCCCCTTTTATTTTCTGGGTAATATTTTCTGTGATTAATGTGCTCACTAACCTGCTAAAGGAAATTGAAAAATCACTTGAAGTGCATAATAAAGCAGAAGAGGTTTTGTCCGAAGCCTCGGATGAAAAGTGTGGATTATCTCAGAATGATGCGAAGGGAAGTTTCAGTCCCTGTGTGACATCCTTGTCCTCAACAGAATGTTTGCATGGTGATATATCAATTTCTAGTGCAAGAGTAATTCTGTGTTTTCCTTTTGAAAGGGCTGGAGATCACACAGATTCATTTTCCTGGGAAAAGTTTATTGCTCTTGATTTTACTCCGTTGTCACCTTTGAACAAGGGTTGCACCCCAGATGGTAGCCAAACTTCAAGTGCAAGTTCAAAGAAAAGATTTCCTTTTGAAGCAGCACAATCTCTTCAGTTGAATTTCTGTGATCTAGATATATACTTGATCACATCAGCAAGTAACGACAGTGATAGAATAAGCTCCAATGATGTGAAGAAAGAGAAATTTTCTGGCAGCTGCTTTCTTTCCATTGCCCGTAGAAGGGGCTGTTTCTCTGTTTTTCGTGCGGTTTGGCAGGAGGGTCAAGTGACTGGTCCTTGGATTGCTAAGAAAGCTAGATTATTTGTTAACTCAGAGCAGTCAATGGGAAAAGATGATTTTGCTGGAGGAGGGTATGAATATTCGTCTGCATCAACGGTGAAAGATTTGGAAGATTGGAAATCTCAAACTCATCAAGAGATGATTCTAAGCTCGTCATTTCTCATGCATGTCCATCTATCTGAAGTTGTGATTAATGTGAATGATTCTCAATATCAAGTCATATATCAGCTTTTACTTCAGATGGTAAATGAACTGACATGTGGGACTTCTCAGGAAGCCAATGTGGATAAAAAAAAATCAGTCTCACAATCCTCAGTTTTTTTGGAATGCGATTCTGTAGAAATTCTTATTAGTAGGGATACATCTGAGAGTATTGAAAGCTCAATCAAGAGTGAGCTTCCTGGACAATGGCATCAATTCAAGCTGAGGGTTCAAAGGTTTGAGTTGCTGTCTGTCACTAATACAGGTGGTGTTAAGGCTGCAAGTTTCTTCCGACTAACCCATGACGAAGGCAAGTTGTATGGGTTCGTTACTGGAGTTCCTGATCATGAGTTTCTTCTGGTTACTTGCAACAACTCCTCTGTGAAGCGAGGTAATGGGGGAGGTTCTAATGCGTTATCTTCTAGATGTGCTGGTTCTGATATTGTATTTCTATCTGACCCAGAGATTTCTCATAAAATTACTTCTATTGCCGTCAGCTGTGGCACAGTTATTGCTGTTGGCGGTCGCTTGGATTGGTTTGTTGTAATAGCATCCTTTTTCAGTTTGCCTACTTCTAATACTGAAGATGCAGATGATACTAGTATTCCAAAGGGGGAACAGGATATCTCTTATACGACTTGTTTTGTTCTCAGCTTGATTGATATTGCTTTGAGTTATGAGCCATATACGAAAAATCTTGTTCAGACTGAGGTCCTTGATTCCGAATCCGGCTCTTCTTATTTCAAAGAAGATATGGGGGAACAATGTGTTTCTTGTCTGTTGGCTGCATCCAACTTGTCACTTTCAAGTTCATCTATGTCAGATTCAGATGAAAGTGTTTTCCAAATTAGAGTGCAAGACTTGGGGCTTTTGCTTCATTTAATATCAAAGCTTGATTCGCTCCCTGGCACTTATAGTGTAGAACATCTTCAAAAGTCCGGTTATGTTAAAGTTGCTCAGGAGGCTTTTCTGGAGGCAATTTTGAAAACCAACTGTGCTAGTGGTCTTCTTTGGGAACTAGAATTATCTAAATCTCACCTTTATGTGGAAACTTGCTATGATACAACTGCTGCTCTCATTCAATTGGCTGCTCAACTTCAGCTATTATTTGCCCCTGATGTCGAGGAGTCCATAGTGCATTTGCAGAATAGGTGGGATAATGTTCAACAAGCACAGCAAAGCGATGAATTTAATAATGAAAGTAAGCATCTCAGATGTGACACAATGGCTTCAACTTCCGAGCAGTGCTCCCCAATGACATATTCAAAGGATGGATCCAGTATAGCTGGCTTGATGGATGAAATATGTGAAGATGCATTTCAAGTAAATGACAATGATGCATGGCAATCATGTTCTTTTGAATCAGGATTTTACATGCCACAGGATGGAAGTTTAATTGAGGCTGGTAAGATGAATTTGGATGCGCCCGAAGTTCTCTCTCCTGAATTATTGTGGACCGAGTCAGTGCCTGTAATAGGACCAGAAGGTAGTCACGCTACATTTCTGCAAGACGGAGGCTTTCCGGAGATTATAGAAAGTTATTGTTTGTCTGACTTACGCCCTCTCTCAGAGCTATCTATAGATATACATTCTGACGAACTTTCTAAAATCATGTTGAGGAATGTGTCACATAGAGAGATTGAAAGAGGAAGTGGTGGATGGTATGGAGGCAACTCTTCAAAAGTATTAGAAAACCATATTTCAGAAGAAAATGGAAAAACTGGACCGATGAAAGCGCATCATGACGTGCTTCATTCTAATGATTGCCCATCTCGCAGCGAGACTTGTGGACGTGTAATTTTAAAGAAAATTGATATAAGATGGAAAATGTATGGTGGTTCTGACTTGGTTGATTCAGGGAAAAATGCACAACATTCTGGGAGGAACACATCTGTTTGCTTGGAACTTGCATTGTCTGGGATGAAATTTCAGTATGATGCATTTCCAGTTGGTGGACTACATGTATCCAAGATGTCTCTGTCTGTTCAAGATTTTTACCTGTATGACAGAAGCCAAAATGCACCTTGGATACTGGTGCTAGGATATTATCACTCAAAGGGTCATCCTAGGGAATCTTATTCAAAAGCATTTAAGTTGGACTTGGAGGCAGTTAGACCAGATCCTCTAACTCCCCTTGAGGAGTACAGGTTAAATGTTGCTTTTCTACCTATGCTATTACATCTACATCAGTGCCAGCTTGATTTTCTTGTTGATTTCTTTGGGAGAAAAAACTCATCAAATGACCAGTTTCCTAATAACTGTCATGAATTGGAGGGTTCAAAATCATTTCCTGAGAGGAGTAAAGATCATGCATGCCATTCAATTGTACAAGAGGCATTGCTTCCTTACTTCCAGAAGCTGGATATACGGTCAATTATTGTTCGGGTGGATTACAGTCCTAATCATGTAGATCTAGCAGCATTAAGGCGTGGGAAATATGTAGAACTTGTAAATCTTATCCCTTGGAAGGGTATTGAGATTAACCTGAAACACGTTCATGCTTCTGGCATCTATGGTTGGGGCAGTGTTTGTGAAACAGCTTTAGGGGAGTGGTTGGAAGATATATCTCAGAATCAGATTCATAAAATACTGCGGGGGCTTCCTACTGTACGATCATTAATTGCAGTTGGGACTGGGGCTGCTAAGCTGATTTCGTCACCAGTAGAGAACTACAAGAAGGAGAGGAGAGTGATCAAAGGTTTGCAGAGAGGTACAATTGCATTTCTTAGAAGCATTTCACTTGAAGCTGTTGCGCTTGGAGTTCATCTAGCTGCCGGAGCCCACGACTTTCTTCTCCAAGCAGAATATAGTCTTTCAAGCATACCTTCTTCAGTTGCTCAGCCTGTAAAAGAGAAATCAAAGACAGGTGTTCGATCTAATCAACCTAAGGATGCCCAACAAGGAATTCAGCAGGCTTGTGAGAGTCTCAGTGATGGCCTGGGAAAATCTGCTGCGGTGTTAGTTCAGAATCCCTTAAAAAAGTTCCAGCGTGGTTCAGGTGCAGGACCTGCCTTGGCTGCTGCTGTTCGAGCAGTTCCTGCAGCTGCCATAGCTCCTGCTTCGGCTTGTGCAAGTGCTGTGCACTATGCTCTTCTTGGATTTAGAAATAGCCTTGATCCTGAACGTAAAAAGGAGTCTATGGAGAAATATTGTCCAACACAACCCTGGGAAGAAGACTGA	5928	0.4094	MFPWNIAKSAEAVFSRWALKRVCKFFLKKKLGQFILGEIDLDQLDVQFSEGTIQLTDLALNLDFINAKLGKTASIMVKEGSIGYLLVKMPWSGKGCEVEVNELELVVSPCIGRTATSEDEVCCSDVGNDNCEIKYSSNRTKNELGDDAMKSISMDVHEGVKTIAKMIKWLLSSFHVKITNVIVAFDPTLDSDEGKEMDCHRTLVLRVSEIECGTSLSEDTESNVDVLGISQLTNFVKFDGAVLEILKIDNENKHKLEAGCGEAGLGSNKSMCPVMTGKQGGFGGNIKLTIPWKNGSLDICKVDADVCVDPVVLRLQPSIIEWLLKSWGTLKNLNKDVKGCKDHNLREPSHLNSALSCPSSTSISITNATGDMITGHRSLPADCASLTQPEDPESLEAVLPAANLISDWVPFSTHLNHKDGIQEPDFGASVDQFFECFDGMRNSQSALGSSGMWNWTCSVFSAITAASSLASGSLHIPSEQKHMETNLRATFSGVSVVLSFCDDEQSHFYEHKIGSTAGSQIDYLGAECNEIVVALKVCPQMITFDGTVKHVEVANFLNIGSDADNQSALVGHLQTKVLDALPLSTSYNLYSDSLIGPVATDFPFGNKDCLLKVTLFKTSGVTKCKFTVQSSSSDGCVTRLTSFSLYMPPFIFWVIFSVINVLTNLLKEIEKSLEVHNKAEEVLSEASDEKCGLSQNDAKGSFSPCVTSLSSTECLHGDISISSARVILCFPFERAGDHTDSFSWEKFIALDFTPLSPLNKGCTPDGSQTSSASSKKRFPFEAAQSLQLNFCDLDIYLITSASNDSDRISSNDVKKEKFSGSCFLSIARRRGCFSVFRAVWQEGQVTGPWIAKKARLFVNSEQSMGKDDFAGGGYEYSSASTVKDLEDWKSQTHQEMILSSSFLMHVHLSEVVINVNDSQYQVIYQLLLQMVNELTCGTSQEANVDKKKSVSQSSVFLECDSVEILISRDTSESIESSIKSELPGQWHQFKLRVQRFELLSVTNTGGVKAASFFRLTHDEGKLYGFVTGVPDHEFLLVTCNNSSVKRGNGGGSNALSSRCAGSDIVFLSDPEISHKITSIAVSCGTVIAVGGRLDWFVVIASFFSLPTSNTEDADDTSIPKGEQDISYTTCFVLSLIDIALSYEPYTKNLVQTEVLDSESGSSYFKEDMGEQCVSCLLAASNLSLSSSSMSDSDESVFQIRVQDLGLLLHLISKLDSLPGTYSVEHLQKSGYVKVAQEAFLEAILKTNCASGLLWELELSKSHLYVETCYDTTAALIQLAAQLQLLFAPDVEESIVHLQNRWDNVQQAQQSDEFNNESKHLRCDTMASTSEQCSPMTYSKDGSSIAGLMDEICEDAFQVNDNDAWQSCSFESGFYMPQDGSLIEAGKMNLDAPEVLSPELLWTESVPVIGPEGSHATFLQDGGFPEIIESYCLSDLRPLSELSIDIHSDELSKIMLRNVSHREIERGSGGWYGGNSSKVLENHISEENGKTGPMKAHHDVLHSNDCPSRSETCGRVILKKIDIRWKMYGGSDLVDSGKNAQHSGRNTSVCLELALSGMKFQYDAFPVGGLHVSKMSLSVQDFYLYDRSQNAPWILVLGYYHSKGHPRESYSKAFKLDLEAVRPDPLTPLEEYRLNVAFLPMLLHLHQCQLDFLVDFFGRKNSSNDQFPNNCHELEGSKSFPERSKDHACHSIVQEALLPYFQKLDIRSIIVRVDYSPNHVDLAALRRGKYVELVNLIPWKGIEINLKHVHASGIYGWGSVCETALGEWLEDISQNQIHKILRGLPTVRSLIAVGTGAAKLISSPVENYKKERRVIKGLQRGTIAFLRSISLEAVALGVHLAAGAHDFLLQAEYSLSSIPSSVAQPVKEKSKTGVRSNQPKDAQQGIQQACESLSDGLGKSAAVLVQNPLKKFQRGSGAGPALAAAVRAVPAAAIAPASACASAVHYALLGFRNSLDPERKKESMEKYCPTQPWEED*	1976

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g2811	1975	Pfam	Autophagy-related protein 2 CAD motif	1222	1289	IPR026885	-
	Mtr4g2811	1975	PANTHER	AUTOPHAGY-RELATED 2, ISOFORM A	13	1966	IPR026886	GO:0006914\|GO:0030242
	Mtr4g2811	1975	Coils	Coil	659	689	-	-
	Mtr4g2811	1975	MobiDBLite	consensus disorder prediction	1865	1884	-	-
	Mtr4g2811	1975	Pfam	Autophagy-related protein C terminal domain	1874	1966	IPR015412	-
	Mtr4g2811	1975	PANTHER	AUTOPHAGY-RELATED 2, ISOFORM A	13	1966	IPR026849	GO:0006914
	Mtr4g2811	1975	Pfam	N-terminal region of Chorein or VPS13	19	115	IPR026854	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g2811	K17906		-	gmx:100805552	2944.84

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g2811	4	41786252	41803971	Mtr4g2811	4	41786252	41803971	ECH