Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2803 ATGGGTACTTCTCAGTCCCGCGAAGGCCGTGAATTCTCCGATTCCGACTCCGATTACGACGAACAAGAACCAGAACAAGAAGAAGATCAAGATCAATACCAAGACGCTCAATCTTCATCCCAATCACATTCCACAAACCTCGACGATGTCGACGCTAAACTCAGTGCCTTAAAACTCAAATACTCTTCACCTTCAAAATCGCAATCAGAGACAAAAACACCACTTCCCAAAAACGCTGTCAAGCTTTACCTTCACATCGGCGGCAACACTCCCAACGCTAAATGGATTCTCTCCGACAAACGAACCTCCTACGCCTTCGTCAAAAACTACGAAGACGAGGAAGAAGACGAACAAAACGATGTTGCTCAAGGTCAATGGATTCTCAAAGTCGGTTCAAAAATCCGCGCTAGGGTTTCCACCGAACTTCAATTAAAGATGTTTGGTGATCAACGCCGTGTAGATTTCGTCTCCAACGGTGTCTGGGCTCTTAAATTCCCCACCGATGAATCCTACCGGAAATTCGTCACTGAGTTTCAAAACTGCACGTTTGAGAATGTTTACGGTTTATCACCGACGGAAGAGAATAAGGTTAAGGTTTACGGGAAGGAGTTTATCGGTTGGGTGAAGCCGGAAGCCGCGGATGATTCCGTTTGGGAAGATGCAGTTTCCGATGATGGCTCCGGGAAGAGTCCGGAGCCTTATCGATCTAGAGGTGATTTGATGGAGGAGTTTGAAGAGGCTGCAAATGGTGGTATCCAAACCCTAACCCTAGGGGCTCTTGATAACAGTTTTTTACTCAATGATGCTGGTTTTCAAGTGTACCGGAATTTTGACCGGGGAATTCGGAAGGGGGTTGCTGTGAAATATGGAGGGAATCTCCAGCAAGAGACGCCTAATAAGGCGTTGTTGATGAGGGCAGAGACTAATATGATGTTGATGAGTCCTATGAATAGTGGAATGCCACATGCTTCGAAGCTGAACCAGCTTGATATAGAAACAGGGAAGATTGTTACAGAGTGGAAGTTTGAGAAAGATGGGGCTGATATTACAATGAGGGATATCACAAATGATACTAAAGGGTCACAATTGGATCCTTCGGAGTCAACATTTTTAGGGTTGGATGATAATAGGCTATGTCAATGGGATATGCGTGATAGAAAAGGAATTGTTCAGAATATAGCAACAGCGAATTCTCCGGTTTTGCATTGGAACCAGGGGCATCAATTTTCAAGAGGGACAAATTTTCAATGCTTTGCAACTACAGGAGATGGTTCAATTGTGGTGGGGTCTCTTGATGGGAAGATAAGGTTGTATTCGAATAAATCGATGAGGATGGCGAAGACGGCTTTTCCAGGGCTTGGTTCACCTATTACAAGCGTTGATGTTACTTTTGATGGAAAGTGGGTGTTGGGTACAACTGATACTTATTTGGTCTTGATTTGTACATTGTTCACTGATAAAGATGGGAAGACAAAGACTGGTTTTGGTGGTCGTATGGGAAACAGGATAGGTGCTCCTAGATTGTTGAAGCTCACTCCTCTGGATTCACATTTGGCTGGAACTACCAACAAGTTTCATGGTGGCCATTTCTCATGGGTCACAGAGAATGGTAAACAAGAACGCCACCTTGTTGCAACTGTGGGCAAGTTCAGTGTGATATGGGATTTTCAGCAGGTAAAGAACAGTGCTCATGAATGTTACAGGAATCAACAAGGGCTGAAAAGCTGTTACTGTTACAAGATAGTATTGAAGGACGAGTCAATCATAGAATCACGGTTTATGCATGACAACTATGCTGTTAGTGACTCCCCTGAAGCTCCGTTGGTGGTAGCAACTCCTATGAAAGTTAGCTCTATCAGTATGTCCGGAAAGCGAACCCGTTAA 1884 0.4432 MGTSQSREGREFSDSDSDYDEQEPEQEEDQDQYQDAQSSSQSHSTNLDDVDAKLSALKLKYSSPSKSQSETKTPLPKNAVKLYLHIGGNTPNAKWILSDKRTSYAFVKNYEDEEEDEQNDVAQGQWILKVGSKIRARVSTELQLKMFGDQRRVDFVSNGVWALKFPTDESYRKFVTEFQNCTFENVYGLSPTEENKVKVYGKEFIGWVKPEAADDSVWEDAVSDDGSGKSPEPYRSRGDLMEEFEEAANGGIQTLTLGALDNSFLLNDAGFQVYRNFDRGIRKGVAVKYGGNLQQETPNKALLMRAETNMMLMSPMNSGMPHASKLNQLDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGIVQNIATANSPVLHWNQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSNKSMRMAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLFTDKDGKTKTGFGGRMGNRIGAPRLLKLTPLDSHLAGTTNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIIESRFMHDNYAVSDSPEAPLVVATPMKVSSISMSGKRTR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2803 627 SUPERFAMILY WD40 repeat-like 326 485 IPR036322 GO:0005515
Mtr4g2803 627 Gene3D - 314 535 IPR015943 GO:0005515
Mtr4g2803 627 MobiDBLite consensus disorder prediction 33 49 - -
Mtr4g2803 627 MobiDBLite consensus disorder prediction 1 49 - -
Mtr4g2803 627 Pfam VID27 C-terminal WD40-like domain 295 568 IPR013863 -
Mtr4g2803 627 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 626 IPR040458 -
Mtr4g2803 627 MobiDBLite consensus disorder prediction 15 32 - -
Mtr4g2803 627 PANTHER DEM PROTEIN 1 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2803 Mtr-Chr4 41719416 41723223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2803 1 625 Acyl Lipid Metabolism Gene Families AT3G19240 69.301 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2803 - - gmx:100819892 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2803 4 41719416 41723223 Mtr4g2803 4 41719416 41723223 ECH