Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2788 ATGTCGTTCCTGCTACTTCTTCTGCCTCAACCTTCCACCGCCACAAGACTCTCTCCATTCACCATCTCCACGTCCACTATCTCCCTTAAACCCTTATCCACCCTTTCACCTCCACGCTCCATTCCAAACTCCACCCTTTCCATTTCCACCTCTCCACCACCAACACCTACAAATGCACCCCCTCCAAAGAAAGTTCTTCTTCCCATCGGTTTCGGCACCGAGGAAATGGAAGCAGTTATCTTAATCCACGTCCTCCGTCGTGCTGGTGCTCATGTCACCGTTGCTTCCGTTGAGCCTCAGCTTCAAGTTGAAGCTGCTAGTGGCACTAAATTAGTTGCTGATGCTTCTATTTCTGAGTGCTCTGATCAAATATTTGATCTTATCGCTTTACCGGGAGGAATGCCTGGTTCAGCAAGATTGAGAGATTGTGATGCCTTGAGAATAATCACATGTAAACAAGCTGAGGAAAATAGGTTATTTGGTGCTATTAATGCTGCTCCTGCTGTTACTCTTTTGCCTTGGGGACTTTTGAAGAGAAAGAAGATAACATGTCACCCTGCATTTTTCCACAAGCTACCAACGTTTTGGGCTGTTAAGTCGAACATTCAGGTTTCAAATGGGCTTACAACAAGCCGTGGCCCGGGAACTGCTTACATGTTTGCTTTAACTTTGGTTGAACAGCTATTTGGGGAGTCTATTGCAAGGGAGGTTGCTGAATTCTTGTTGATGAGAACTGATGATGACAATGTATCTAAGAAGGAGTTTAATGAAATTGATTGGTCTGTTGGCCACCATCCCCCCAGTGTTCTCATCCCAATCGCACATGGTTCTGAAGAGATTGAAGTAGTGACCCTAATAGATATTCTAAGGCGAGCAAAAGCTAATGTCGTAGTTGCTTCTGTTGAGAAAACTCTTGGAGTCATGGCTTCTCAAGGAACCAAAATTGTTGCTGATAAATTAATTAGTGATATTCAAGAGTCAGCACATGATTTGATTATTCTCCCGGGAGGAACTGCTGGCGCTGAAAGGCTAAGCAAGTCAAGAATTCTGAAGAAGCTTCTGAAAGAACAAAATTCAGCTGGAAGAATATACGGAGCCGTCTGCTCCTCACCTGCTATTCTACACAAACAAGGTTTACTAAAGGACAAGAAGGCTACAGCTCATCCCTCTGCCCTAAACAAACTTAAAGACGGAGCAGTAAATGATGCCGTAGTAGTTATTGATGGCAAAGTGATTACTAGTGAGGGACTTGCCACTGTAACTGATTTTGCATTGGCTATTGTGAGCAAGTTATTTGGTAATGGAAGAGCAAGAAGTGTAGCAGAAGGCCTTGTTTTTGAGTATCCTAGGAAATAG 1356 0.4388 MSFLLLLLPQPSTATRLSPFTISTSTISLKPLSTLSPPRSIPNSTLSISTSPPPTPTNAPPPKKVLLPIGFGTEEMEAVILIHVLRRAGAHVTVASVEPQLQVEAASGTKLVADASISECSDQIFDLIALPGGMPGSARLRDCDALRIITCKQAEENRLFGAINAAPAVTLLPWGLLKRKKITCHPAFFHKLPTFWAVKSNIQVSNGLTTSRGPGTAYMFALTLVEQLFGESIAREVAEFLLMRTDDDNVSKKEFNEIDWSVGHHPPSVLIPIAHGSEEIEVVTLIDILRRAKANVVVASVEKTLGVMASQGTKIVADKLISDIQESAHDLIILPGGTAGAERLSKSRILKKLLKEQNSAGRIYGAVCSSPAILHKQGLLKDKKATAHPSALNKLKDGAVNDAVVVIDGKVITSEGLATVTDFALAIVSKLFGNGRARSVAEGLVFEYPRK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2788 451 CDD GATase1_DJ-1 269 431 - -
Mtr4g2788 451 MobiDBLite consensus disorder prediction 33 62 - -
Mtr4g2788 451 MobiDBLite consensus disorder prediction 33 52 - -
Mtr4g2788 451 TIGRFAM not_thiJ: DJ-1 family protein 269 442 IPR006287 -
Mtr4g2788 451 TIGRFAM not_thiJ: DJ-1 family protein 64 239 IPR006287 -
Mtr4g2788 451 CDD GATase1_DJ-1 65 228 - -
Mtr4g2788 451 PANTHER PROTEIN DJ-1 HOMOLOG C 45 449 - -
Mtr4g2788 451 Pfam DJ-1/PfpI family 268 429 IPR002818 -
Mtr4g2788 451 Pfam DJ-1/PfpI family 63 227 IPR002818 -
Mtr4g2788 451 SUPERFAMILY Class I glutamine amidotransferase-like 266 449 IPR029062 -
Mtr4g2788 451 SUPERFAMILY Class I glutamine amidotransferase-like 62 244 IPR029062 -
Mtr4g2788 451 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 45 449 - -
Mtr4g2788 451 Gene3D - 262 451 IPR029062 -
Mtr4g2788 451 Gene3D - 57 255 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2788 Mtr-Chr4 41552692 41556117 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2788 - - cam:101504394 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2788 4 41552692 41556117 Mtr4g2788 4 41552692 41556117 ECH