Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2787 ATGTTGAAACTAATTGGAAGAAAATCAAGTTGGATACCCTCCAATTTATTGTTAAGAAGAGAATTGTGTTTGGGTGCCCTTCCTAATGGCGGAGCCATGGAACACTTGATCACTCAACTTCAATCTCATGTTCATAAGGTTCTTGCTGGTGGTGGACCCGAAGCTGTCAAGAGGAATAATAGTAGAAATAAACTTCTACCCAGAGAAAGAATTGATCGTCTTCTTGATCCTGGTTCTTCCTTCCTTGAGCTTTCACAGCTTGCAGGGCACGAGTTGTATGAAGAGCCTTTGCCTTCTGGTGGGGTTGTGACTGGGATCGGTCCAGTGCACGGCCGACTTTGTATGTTCGTGGCAAATGACCCTACTGTTAAAGGAGGGACTTATTATCCTATTACAGTTAAGAAACATCTCAGAGCACAGGAGATTGCGGCTCAATGCAAATTGCCGTGTGTGTATCTTGTTGACAGTGGTGGTGCTTTCCTTCCCAAGCAGGCTGATGTCTTTCCAGATAAGGAAAATTTCGGTAGAATATTCTATAATCAGGCTATAATGTCTGCTCAAGGGATTCCCCAAATTGCATTGGTGTTAGGCTCTTGCACTGCTGGTGGTGCCTATATACCTGCTATGGCTGATGAAAGTGTGATGGTCAAGGGAAATGGCACTATTTTTTTAGCAGGGCCCCCTCTTGTTAAGGCTGCCACTGGAGAAGAAGTCTCTGCGGAGGATTTGGGAGGTGCTGCAGTGCATTGCAAGACATCGGGTGTTTCAGACTATTTTGCTCAAGATGAATTTCACGCACTTGCACTTGGGAGGGACATCGTTAAGAATTTGCATATGGCTGGGAGAGATGTCTCGACAAATGGATTGCAAAACACGAGTTATGAGTATAAAGAGCCACTATATGATGTCAATGAACTTCGTTCAATTGCCCCTACTGATCTTAAGCAGCAGTTTGATATCCGAGAAGTGATTTCTCGCGTTGTTGACGGAAGTGAATTTGATGAATTCAAGAAACTGTATGGCACTACTCTTGTAACAGGTTTTGCAAAGATCTTTGGACAGCCTGTAGGAATTATTGGAAACAATGGAATTTTATTCAATGAATCGGCTCTGAAAGGGGCCCATTTCATTGAACTATGTACTCAACGTAACATTCCCTTGGTCTTTCTTCAGAACATCACCGGATTCATGGTGGGCTCAAAATCCGAGGCAAATGGCATAGCAAAGTCAGGTGCAAAAATGGTGATGGCTGTATCTTGCGCAAAGGTACCTAAAATCACTATAATTGTTGGTGGAAGCTTTGGTGCTGGAAACTATGCAATGTGTGGTCGTGCCTATAGTCCGAACTTCATGTTCCTTTGGCCTAATGCTAGAATATCTGTGATGGGTGGTGCTCAGGCTGCTGGTGTTCTGTCTCAAATAGAGAAAGGCAATAAGAAAAAGCAAGGAATTCAGTGGAACAAGGAAGAAGAGGAAAAGTTCAAAGCGAAAGTAGTTGAGGCGTATGAGAGAGAAGGAAGTCCTTATTACTCAACGGCGAGGCTTTGGGATGATGGAATCATTGATCCAGCTGATACAAGAAAAGTGATTGGTCTATGTGTCTCTGCTTCCTTGAACCGTGCCACAGAAAATACCAAATATGGTGTATTTAGAATGTGA 1659 0.434 MLKLIGRKSSWIPSNLLLRRELCLGALPNGGAMEHLITQLQSHVHKVLAGGGPEAVKRNNSRNKLLPRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQADVFPDKENFGRIFYNQAIMSAQGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGAAVHCKTSGVSDYFAQDEFHALALGRDIVKNLHMAGRDVSTNGLQNTSYEYKEPLYDVNELRSIAPTDLKQQFDIREVISRVVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSKSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKGNKKKQGIQWNKEEEEKFKAKVVEAYEREGSPYYSTARLWDDGIIDPADTRKVIGLCVSASLNRATENTKYGVFRM* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2787 552 SUPERFAMILY ClpP/crotonase 34 275 IPR029045 -
Mtr4g2787 552 SUPERFAMILY ClpP/crotonase 292 552 IPR029045 -
Mtr4g2787 552 Gene3D - 291 552 - -
Mtr4g2787 552 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 33 289 IPR011762 -
Mtr4g2787 552 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 29 552 IPR045190 -
Mtr4g2787 552 Pfam Carboxyl transferase domain 59 543 IPR034733 -
Mtr4g2787 552 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 298 544 IPR011763 GO:0016874
Mtr4g2787 552 Gene3D - 28 281 - -
Mtr4g2787 552 PANTHER BNAA03G50840D PROTEIN 29 552 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2787 18 552 Acyl Lipid Metabolism Gene Families AT4G34030 78.611 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2787 K01969 - gmx:100777651 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2787 4 41548620 41552329 Mtr4g2787 4 41548620 41552329 ECH