Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2786 ATGGCTTCCTCAACTTCCCTTTCTCTCACTTCTTCCTCTCACCTTCACATACCCACATTCTCTTCTTCCCCTTCACGTCTCAATCCTCTTCCCTCATTTCCCTTCCATTCCCGAATCACCCACAAACCCCTTCACCTTCAAACCCCTCTTCTCCTTTACCCCAAGATTCGTTCTTTGCGTCAAGAAATCAGAGCTACACCAGTTAACAAAGATCTGTGGGAAAAATCGATTCTGAAAAGTGAAACTCCAGTCCTTGTTGAGTTCTATGCAAATTGGTGTGGTCCATGCAAGATGGTACACCGAGTTATTGACGAGATTGCAACAGAGTATGCTGGAAGACTCAAGTGCTTTGTACTAAACACAGACGCCGATATGCAAATTGCTGAAGAATATGGAATTAAGGCAGTACCGGTGGTTGTATTGTTTAAAAATGGCAAAAAATGTGATGCTGTAGTTGGTACCATGCCAAAGGAATTTTATGTGACTGCAATTGAGAGGATGCTCAAGTCTTAA 513 0.4288 MASSTSLSLTSSSHLHIPTFSSSPSRLNPLPSFPFHSRITHKPLHLQTPLLLYPKIRSLRQEIRATPVNKDLWEKSILKSETPVLVEFYANWCGPCKMVHRVIDEIATEYAGRLKCFVLNTDADMQIAEEYGIKAVPVVVLFKNGKKCDAVVGTMPKEFYVTAIERMLKS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2786 170 Pfam Thioredoxin 67 162 IPR013766 -
Mtr4g2786 170 TIGRFAM thioredoxin: thioredoxin 70 166 IPR005746 GO:0015035
Mtr4g2786 170 PANTHER GEO12009P1 28 169 - -
Mtr4g2786 170 ProSitePatterns Thioredoxin family active site. 85 103 IPR017937 -
Mtr4g2786 170 PRINTS Thioredoxin family signature 84 92 - -
Mtr4g2786 170 PRINTS Thioredoxin family signature 92 101 - -
Mtr4g2786 170 PRINTS Thioredoxin family signature 132 143 - -
Mtr4g2786 170 ProSiteProfiles Thioredoxin domain profile. 24 170 IPR013766 -
Mtr4g2786 170 PANTHER THIOREDOXIN M3, CHLOROPLASTIC 28 169 - -
Mtr4g2786 170 Gene3D Glutaredoxin 65 170 - -
Mtr4g2786 170 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g2786 170 SUPERFAMILY Thioredoxin-like 53 168 IPR036249 -
Mtr4g2786 170 CDD TRX_family 75 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2786 Mtr-Chr4 41543946 41547179 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2786 K03671 - gmx:100306680 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2786 4 41543946 41547179 Mtr4g2786 4 41543946 41547179 ECH