Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2769 ATGGAGATCGCTAACGAACCACCGCCTTCTCTCGACGGAACTCCAATCGCCGCCACCACACCTTCCTCCTCTTCCCCTTCCTCTTCCTCTTCGTCTCCACGCGGTTCCAAAGGAAAGGAGATCGATGCGGAAGCAGTCGCCACCGCATCAACAGCACCGCCATCTGCAAAATACGATGACGACGATGAAGATGAAGAGGATGTTTGCCGTATTTGCCGGAACCCTGGTGATGCTGATAATCCATTACGGTATCCGTGCGCGTGTAGCGGGAGTATTAAATTTGTTCATCAAGATTGTCTCCTTCAGTGGCTTAATCATAGCAACGCTCGTCAATGCGAGGTTTGCAAGCATCCGTTTTCCTTTTCACCTGTTTATGCAGAGAATGCTCCTGCTAGGTTGCCTTTTCAAGAGTTTGTGGTTGGAATGGCGATGAAAGCTTGCCATGTCTTGCAATTCTTTGTGCGTCTGAGTTTTGTGTTATCTGTGTGGCTCTTAATTATACCTTTCATAACATTCTGGATATGGAGGTTAGCTTTTGTGAGGAGTTTCGGTGAAGCCCAGAGGTTATTCTTGAATCATTTATCAACGGCGGTTATTCTGACTGATTGCCTCCATGGTTTCCTGCTTTCTGCAAGCATTGTCTTCATTTTTCTTGGGGCTACTTCTTTGAGAGATTACTTTAGGCATTTACGAGAAATTGGGGGACAGGATGCTGAGAGAGAAGATGAAGTGGACAGAAATGGTGCCCGGGTTGCCAGAAGGCCTGCTGGACAAGCTAATCGTAATGTTAATGGTGATGCAAATGGAGAAGATGCTGTTGCAGCACAAGGAGTTGCGGGGGCAGGTCAAGTAATTAGAAGGAATGCTGAAAATGTTGCTGCACGATGGGAGATGCAAGCAGCACGTCTCGAGGCGCATGTTGAACAGATGTTTGATGGTCTGGATGACGCTGATGGGGCAGAAGATGTACCCTTTGATGAACTTGTTGGCATGCAGGGTCCGGTTTTTCATTTGGTTGAAAATGCATTTACGGTGCTGGCAAGCAATATGATTTTCCTTGGGGTTGTAATCTTTCTGCCCTTCTCATTGGGTCGCATAATTCTTCATTATCTATCATGGTTCTTTTCTACTGGTAGTGATGCGGTTTTATCGGTGGTAGTCCCACCTACAGACGCTTCTCTTTCCCTAGCAAATATTACATTAAAAAATGCATTAACAGCTGTTCAAAATTTATCAACTGCTACTCAAGAAAGTGGATCAATTGGTCAGATTGCAGAAATGCTAAAAGTGAATGCAAGTGAATTGAGTGAAATGTCAAACAACATAACTGCATCTGTTTCGGATGATCTCTTGAAAGGAGGGTCAATTGGAACTTCCAGGATTTCTGATGTTACTACTCTGGCAGTTGGATATATTTTCCTATCGACTCTAATTTTCTGCTACTTCGGTGTTGTTGCGTTAATTCGTTACACAAAGGGTGAACCTTTGACTGCAGGAAGATTTTATGGTATTGCTTCTATAGCAGAGACAATTCCATCTCTCTTCAGGCAGTTTTTAGCAGCAATGAGGCATTTGATGACCATGGTGAAGGTTGCTTTCCTATTAGTTATTGAATTAGGGGTATTTCCCCTGATGTGTGGGTGGTGGCTCGATGTTTGCACCATACAGATGTTTGGGAAGACGATGGTTCACAGAGCTCAGTTCTTCTCTGCTTCTCCTTTAGCTAGCTCATTGGCTCATTGGGTTGTAGGGATCGTGTACATGCTACAAATTAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGGAATGGGGTTTTGTACTTCCTTCGGGATCCGGCTGATCCAAACTATAATCCATTCCGTGATCTGATAGATGATCCTGTGCACAAACATGCTCGCAGGGTTTTGTTATCTGTTGCGGTTTATGGGAGTTTGATTGTTATGCTGGTATTTTTGCCAGTTAAACTTGCAATGCGGATGGCACCTTCCATTTTTCCACTTGAAATATTGCTATCTGATCCCTTCACCGAAATTCCAGCTAACATGCTTCTCTTCCAGATCTGTATACCATTTGCTATCGAGCATTTTAAACTCAGGACAACTATCAAATCCCTTCTTCGCTATTGGTTTTCAGCAGTTGGTTGGGCACTTGGTTTAACTGATTTCTTACTGCCTAGACCTGATGACAATGGTAATCAAGAAAATGGAAATGGGGAGCGAGGTAGGCAGGAAAGGCTACAGATAGTACAAGCAGGGGTACACGATCAGGGTATGGTTCCATTTGCTGGCGATGATTTGAACAGAGTCACTAATGCAGATGCTGGAGAGGATTACGACAGCGACGAACAACCTGATTCTGATTATGCCTTTGCACTTCGCATTGTTCTTCTGCTGGTCATTGCTTGGATGACTCTCCTTGTCTTCAACTCTGCCCTGGTAGTTGTACCAATATCACTGGGAAGGATACTTTTCAACTCCATTCCCCGTCTACCTATAACTCATGGCATTAAGTGCAATGATTTGTATGCCTTCATCATTGGAAGTTATGTGATCTGGACTGCTGTTGCTGGAGTTAGATACTCAATCGAGCAAATTAGAAAACGAAGGACTTCAGTTTTGTTGAACCAAATTTGGAAGTGGTGTAGCATTGTTGTCAAGAGTTCTGCCCTTTTGTCTATATGGATATTTGTCATCCCAGTGCTGATTGGGCTTCTCTTTGAGCTTTTGGTCATTGTACCAATGAGAGTTCCAGTGGATGAAAGTCCAGTATTCCTCCTTTATCAAGACTGGGCATTGGGCCTTATATTTCTCAAGATATGGACTAGATTGGTTATGTTGGACCACATGATGCCTCTAATGGATGAAAGTTGGCGAGTAAAGTTTGAGAGAGTGAGAGATGATGGTTTCTCCAGGCTGCAAGGTCTTTGGGTCCTACGAGAGATTGTACTTCCAATCATAATGAAACTATTGACAGCGTTATGTGTACCTTATGTTTTGGCCAGAGGTGTGTTTCCAGCACTTGGGTACCCATTAGTGGTCAATTCTGCTGTCTATCGATTTGCATGGTTGGGATGCCTCTCTTTCAGTTTCGTGTGTTTTTGTGCCAAGAGATTTCACGTCTGGTTTACAAATCTCCACAATTCAATTCGTGATGACCGGTATCTGATTGGCCGGAGGTTGCATAACTTCGGAGAACATGTTGAGAAGGCAAATGAAGCTGCAACTTCTACAGGAGTGCAGGATGCTATTTTACTTGGTCCAAATATAAATCAACAAGATCGTGACGCAGATGTTGGACTTCGATTGAGGCACATAAATCAACAGGCGGTCTGA 3336 0.4382 MEIANEPPPSLDGTPIAATTPSSSSPSSSSSSPRGSKGKEIDAEAVATASTAPPSAKYDDDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFVRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQRLFLNHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDAEREDEVDRNGARVARRPAGQANRNVNGDANGEDAVAAQGVAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFLPFSLGRIILHYLSWFFSTGSDAVLSVVVPPTDASLSLANITLKNALTAVQNLSTATQESGSIGQIAEMLKVNASELSEMSNNITASVSDDLLKGGSIGTSRISDVTTLAVGYIFLSTLIFCYFGVVALIRYTKGEPLTAGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRAQFFSASPLASSLAHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLEILLSDPFTEIPANMLLFQICIPFAIEHFKLRTTIKSLLRYWFSAVGWALGLTDFLLPRPDDNGNQENGNGERGRQERLQIVQAGVHDQGMVPFAGDDLNRVTNADAGEDYDSDEQPDSDYAFALRIVLLLVIAWMTLLVFNSALVVVPISLGRILFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGVRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLMDESWRVKFERVRDDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPALGYPLVVNSAVYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVEKANEAATSTGVQDAILLGPNINQQDRDADVGLRLRHINQQAV* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2769 1111 ProSiteProfiles Zinc finger RING-CH-type profile. 61 122 IPR011016 GO:0008270
Mtr4g2769 1111 MobiDBLite consensus disorder prediction 15 36 - -
Mtr4g2769 1111 ProSiteProfiles Zinc finger RING-type profile. 69 116 IPR001841 -
Mtr4g2769 1111 SMART ringv_2 68 116 IPR011016 GO:0008270
Mtr4g2769 1111 PANTHER ZINC FINGER, RING-CH-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 57 1054 - -
Mtr4g2769 1111 Coils Coil 286 306 - -
Mtr4g2769 1111 SUPERFAMILY RING/U-box 64 120 - -
Mtr4g2769 1111 Pfam RING-variant domain 69 115 IPR011016 GO:0008270
Mtr4g2769 1111 MobiDBLite consensus disorder prediction 1 63 - -
Mtr4g2769 1111 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 127 IPR013083 -
Mtr4g2769 1111 MobiDBLite consensus disorder prediction 238 268 - -
Mtr4g2769 1111 PANTHER SSM4 PROTEIN 57 1054 - -
Mtr4g2769 1111 CDD RING_CH-C4HC3_MARCH6 68 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2769 Mtr-Chr4 41384443 41391481 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2769 K10661 - gmx:100813205 1944.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2769 4 41384443 41391481 Mtr4g2769 4 41384443 41391481 ECH