Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2604 ATGCCAACAACATCATCCTCTATTTCGAACAACGTAGACACAGACTTCAACTCACCTCTCTTACCACCACCATCCAATGAATCCACACCAGAGAAACAATGCATCGACGAGATGCTACAAAACTACTGCGGCGAGTTCGGACGGTGGCAGCTAAAGCATTTCGTACTAACAAGTCTCGCATGGGCATTGGAAGCATTCCATACAATGGTTATGATATTTGCTGACCGTGAACCAGAATGGAGGTGTCTCGACGGTGTTGCCGGTTTGGGGTGTGACTTGACGGCGAAGAATGTGTGTAAACTTGAACCGGGTTCGTGGGAATGGGTGGGAGGTGCGGCTTCTTCGACGGTGGCGGAATGGGGTTTGGTTTGTGGTGAGAAGTTTAAGGTTGGGCTTGTTCAAGCCGTGTTTTTCGCTGGATGTATGTTCGGGGCTGGAATCTTTGGTCATCTCTCTGATTCGTTTCTTGGACGAAAAGGATCTCTCACGATAGTTTGCATCCTAAACAGCATCTTCAGCATCCTAACAGCCTTCTCCCCCAATTACATCTCCTACTTCTTCCTCCGCTTCCTCACTGGTTTCAGCACAGGTGGCGTCGGCCTCTGCGCCTTCGTACTTGCCACAGAGCCCGTAGGCCCCACAATGCGTGGTGCCGCAGGCATGTCTACCTTCTACTTCTTCTCAACAGGCATCGCAGTCCTCTCAGGCATAGCAAACATCTTCCCAAGATGGCGCGAACTATACATAGCCTCCTCAATTCCCTCCCTTGTATTCCTCCTCTTTGTCCTCCCCTTCATCTCTGAGTCCCCTCGATGGTACCTTGTTCGAGGACGAATCAAAGAAGCCATGAACATCATGTCCACTATAGCTACCTCTAATGGCAACCACCTTCCACACAGAGTTTTTCTCACACTCGACGAAGAACCATCATCATGTAATAACAATATGGATGACAAAGATGCAGTGACAGGATCTCTGGTGGATGTGATTCGTTCACCAGTAACACGTACACGTTTGGTTTTAGCAACAATCATCAACTTATTGTGCTCAGTGGTGTACTATGGTCTAAGCCTAAACGTAGTAAACCTCGAAACAAATCTTTACCTTAACGTAATACTCAACGCAGTGGCGGAGATGCCAGCGTTCATGATAACAGCAATCTTGTTGGATAAGTTTGGGAGGAAGCCATTAACAATAGGGACATTATGGTTCAGTGGATTCTTTTGTTTTGTGGGGAGTTTGATGAGAAATAAGGGGGTGTGGAAAGGAATGAAAATGGTGTGTGGAATTTTGGGAATATTTGGGATGGCAGGGACTTATAATTTGCTCTTTATTTATACGGCGGAGTTGTTCCCAACGGTTGTTAGGAATGCTGCACTTGGGTGTGCTACACAAGCAGCACAAATGGGTGCAATATTGGCACCAGTTGTTGTCGTTTTAGGTGGATCATTGCCGTTTGCTTTATTTGCTTTTTGTGGAATTGCTGCTGGGGTTTTTGCGTTTTTCTTGCCAGAGACACTAAACCAACCACTCTATGATACATTAACTGGAATGGAGGCAGGGCAAAAGGTCACTTCTGCAACATCTAGTGTATGA 1596 0.4662 MPTTSSSISNNVDTDFNSPLLPPPSNESTPEKQCIDEMLQNYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADREPEWRCLDGVAGLGCDLTAKNVCKLEPGSWEWVGGAASSTVAEWGLVCGEKFKVGLVQAVFFAGCMFGAGIFGHLSDSFLGRKGSLTIVCILNSIFSILTAFSPNYISYFFLRFLTGFSTGGVGLCAFVLATEPVGPTMRGAAGMSTFYFFSTGIAVLSGIANIFPRWRELYIASSIPSLVFLLFVLPFISESPRWYLVRGRIKEAMNIMSTIATSNGNHLPHRVFLTLDEEPSSCNNNMDDKDAVTGSLVDVIRSPVTRTRLVLATIINLLCSVVYYGLSLNVVNLETNLYLNVILNAVAEMPAFMITAILLDKFGRKPLTIGTLWFSGFFCFVGSLMRNKGVWKGMKMVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPVVVVLGGSLPFALFAFCGIAAGVFAFFLPETLNQPLYDTLTGMEAGQKVTSATSSV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2604 531 ProSitePatterns Sugar transport proteins signature 2. 191 216 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g2604 531 ProSitePatterns Sugar transport proteins signature 1. 385 401 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g2604 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 521 - -
Mtr4g2604 531 Gene3D MFS general substrate transporter like domains 106 514 IPR036259 -
Mtr4g2604 531 SUPERFAMILY MFS general substrate transporter 126 511 IPR036259 -
Mtr4g2604 531 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 35 521 - -
Mtr4g2604 531 MobiDBLite consensus disorder prediction 1 31 - -
Mtr4g2604 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 53 508 IPR020846 GO:0022857
Mtr4g2604 531 Pfam Sugar (and other) transporter 127 512 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2604 Mtr-Chr4 39567325 39571085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2604 6 522 Organic Solute Cotransporters AT3G20660 67.885 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2604 K08202 - gmx:100805613 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2729 2 40532166 40541511 Mtr4g2604 4 39567325 39571085 PCT