Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2603 ATGTCGGTTTCAGTAACATCATCACTAGTTGCTCCAACCCCTAATGCTAACTCCGATTTCTCTAGACGTTCTGCAAATTATCACCCCAACATTTGGGGGGACCTTTTTATTCAATATGTTTTGGAACCTATGGAATTTGATGAAATAATGAAGCAGATTATAATGCTAAAAGAAAAGGTGAGGCAGATGCTAGTCCCTAACGTAAATGTCACAAACCCTTCGAGGGAAGCTAATTTGATTGATTCAATCCAACGTTTGGGATTATACCATCATTTTGAGCAAGAGATTGGAGAATTATTGCGACATATTGACAATAATCATGTTGAAAATGGAACAATAACTCTTAACGAAGACCTTCATTCAATTGCACTTGTCTTTAGGTTACTAAGGCAACAAGGATATCACATTTTGCCTGATGTTTTTAAGAAGTTCAAGAATGAGCAAGGAAACTTCAAAGAAACACTTGTTGGTGATGTTGAGGGGATGCTAAGTTTGTATGAAGCCACACATATGAGGATTCATGGAGAGGAGATATTAGATGATGCACTTTCTTTCACTTCCTTACACCTTGAAATGATGACCACTCAATTGAGTCCTTCTGTTGCTACAAAAATCAATCATAGCTTAAAGCGGCCACTCTTCAAGAACTTGCCTAGGCTTGTGGCAAGGCATTACATTTCCACTTATGAGGAAGATCCATCTCATGATGCAACTTTGCTATTACTTGCCAAATTAGATTTCAATTTGCTTCAAAAACAACATCAGAAAGAAGTTGGCGATATTTCAAAGTGGTGGAAAGATTTAGATTTTGCAACAAAACTACCTTTTGCTCGCAATAGAATAGTTGAAGCTTACTTTTGGATATTGGGAGTGTATTTTGAGCCTCAATACTCTTTTGGTAGAAGAATAATGACCAAGGTGATATCCTTGGCCTCAGTAATTGATGACATATATGATGTTTATGGTACAATAGAAGAGCTACAACTTTTCACTCAAGCAATTGAAAGGTGGGATATAAGTTGCATGGATTTTCTACCACAATACATGAAATTTTGTTATAAAGCCGTTTTGGATGTTTATGAAGAAATGGAGCAAGAGATGGTCAAGGAAGGCAGAGCATTTTGTGTATTCTATGCCAAAAATGAAATGAAAAGATTGGTCCAGGCATACTTTACTGAGGCTAAATGGTTCAGTAGAAATTATATACCAACAGTGGATGAATACATGGCTCTTGGAATAGTAAATTCTGGTTACTATCTAATCACAGCAACATCCTTCATTGGAATGGGATGCATTGCTACAGAAGATGTTTTCCAATGGTTAACCAATAACCCCAAAATTGTCAATGCTTCATCTAAAATTGCTAGACTCATGGATGATATTGTTTCCAATGAGTTTGAGCAAGAGAGAGGGCATGGTGCCTCTGCTATTGAGTGCTACATGAATGAACATGGTGTGTCTAGAGAAGATGCAGTTAATGAACTTTCAAGACAAGTCACAAATGCTTGGAAGGATACAAATGAGGAACTTCTTGATCCAACTGAAGTGCCAAAGCCTCTACTTATACGAGTTCTCAATTTGTCACGTGTCATTGATGTGCTTTATAAAGATGGAGATTGCTACACTAACTCCCAAGGATCAACAAAGAATGACATAATATCTATCTTGTTGAATCCATGTCCAGTATGA 1689 0.3706 MSVSVTSSLVAPTPNANSDFSRRSANYHPNIWGDLFIQYVLEPMEFDEIMKQIIMLKEKVRQMLVPNVNVTNPSREANLIDSIQRLGLYHHFEQEIGELLRHIDNNHVENGTITLNEDLHSIALVFRLLRQQGYHILPDVFKKFKNEQGNFKETLVGDVEGMLSLYEATHMRIHGEEILDDALSFTSLHLEMMTTQLSPSVATKINHSLKRPLFKNLPRLVARHYISTYEEDPSHDATLLLLAKLDFNLLQKQHQKEVGDISKWWKDLDFATKLPFARNRIVEAYFWILGVYFEPQYSFGRRIMTKVISLASVIDDIYDVYGTIEELQLFTQAIERWDISCMDFLPQYMKFCYKAVLDVYEEMEQEMVKEGRAFCVFYAKNEMKRLVQAYFTEAKWFSRNYIPTVDEYMALGIVNSGYYLITATSFIGMGCIATEDVFQWLTNNPKIVNASSKIARLMDDIVSNEFEQERGHGASAIECYMNEHGVSREDAVNELSRQVTNAWKDTNEELLDPTEVPKPLLIRVLNLSRVIDVLYKDGDCYTNSQGSTKNDIISILLNPCPV* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2603 562 SFLD Terpene Cyclase Like 1 C Terminal Domain 237 560 IPR034741 -
Mtr4g2603 562 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g2603 562 Gene3D - 71 235 IPR036965 GO:0010333|GO:0016829
Mtr4g2603 562 SFLD Isoprenoid Synthase Type I 237 560 - -
Mtr4g2603 562 SUPERFAMILY Terpenoid synthases 235 562 IPR008949 -
Mtr4g2603 562 CDD Terpene_cyclase_plant_C1 22 559 IPR044814 GO:0010333|GO:0016102
Mtr4g2603 562 Gene3D Farnesyl Diphosphate Synthase 29 550 IPR008949 -
Mtr4g2603 562 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 235 IPR008930 -
Mtr4g2603 562 Pfam Terpene synthase family, metal binding domain 240 505 IPR005630 GO:0000287|GO:0010333|GO:0016829
Mtr4g2603 562 Pfam Terpene synthase, N-terminal domain 31 209 IPR001906 GO:0010333|GO:0016829
Mtr4g2603 562 PANTHER OS04G0344100 PROTEIN-RELATED 14 546 - -
Mtr4g2603 562 PANTHER TERPENE SYNTHASE 2-RELATED 14 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2603 Mtr-Chr4 39559627 39562825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2603 K15803 - aprc:113865764 776.933