Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2589 ATGCGTGCCCCTATTTCTAGAAAACTATGCACTCTCAGCTCCAATATTCTTTCACATTTACAAAACAATGCAAAGAAAAACCTTTCATCTATCAAAATTTCACCTCATTATGAAGAAACCCATCACCATTTTCATTCTGACCTGAACCTATCAACCCTCAAACACAATCATGTTCCACCCCCAGATGAAGAGGAGGATTTGTCTGGCTCTGATTTTCAGCTTTCTGGCATATTGACCTCCTCTTCGGCAGAGAAGGTTGACTGTGAGGGAGTTGATGATGAAGAAAAGGAGAAAAGGGTTGTGGAGATACCGCTGATACGGGACATTCATCATTGTGATTTATCAAAGAAACGGAATGAATCGTCTCGTGAGAGGAAACACAAATGGATTTTCAAAGACACTGGTGGTGAACGATCTGACCGGTTACTCAAAATATGTGCAAAAAAACTAGGAACGACTACTACTGTTGATGTGTTTGGCTACTTGGGCCGAGAAACTGGTGTGAAAGAGTATAATGGATTGATCAAGTTGTGCATAAAGAAGGTCAGGGAGACTAATGATGAAAACGTCTGTATAGAAGAAATGAATAAGATTTACAACCTTTTAAAATTAATGAGGGAATGTGGGTTTCAGATAGAAGAGCAAACATATCGTCCACTTTTTGAGTATATAATTGACATGGGCTTTGTTCAAGAATTTGAACTTTTCTATGATGTTATCAAAGCCGGTAATCCCAGTTCAATTTCACGATTGGGTTACTATGAAATGTTGCTGTGGATGAGGGTTAACAATGAAGAAATGATCCGGGATATTTGCGAATACATTACTGTGGAAGAGAGTAAAGACACTTCTGCTTTACGAGAAAGTTACTTATTGGCTCTCTGTGAAAGTGACCGCAAGACACAGATTTTGGACGTGTTGAAAAATATAGACATAACAAAGCTTAAATCTGCAAAATCTATATCAAATATATTCCAATCATTGGGAAGGCTACTGCTGGAATCAGAAGCGGAGAGTTTACTTTTGGATTTGAGAGCATGTGATTACGGTGCAGATAAAATTTCAAACTTCATTGCTAGTTATGCAGTTAGCATTCCAAATTTAGAGGTTGAGGATATGGTCTTAAAAATCGAGAATTTGCATGATGTGTTGGAAGTTTTGCTATCATCATCGGCGTATGAAAAGCTCATTCTGTATTGCTGTGGTATGCACAAGGTGGATGTAGCTCTTGATATTGTTGATAAAATGTGTCAAGCAGGCTTTGAGCTGTCTACTCATGTGTTACAATCCATATTACAGATTTGCGAGGAAGCTTATGATTATATTTTGGTCCATCGAATCTGTTCCATCATAAGGTGCCATCATCACTATTTGCAATTAAATGGCGACATATGCAGGTGTTTGGTGCACTTCTGTGTAAGGTTAAAAGATTTTGAACGTGCATACAAGATGGTTAATGAATTGCATGAATTGGGTTTCAAACCTACGACAGCCATGTACAATGCCATAATGGCAGGATATTTTCGTGAGAAAAACATCAGTGGTGCCTTAAGGGTCCTCAAACACATGCAAGAGGCCAATGTAAAGCCTGATTCACAGACTTTCAGCTATTTGATTGGCAATTGTGAAACAAAAGATGATATAAATATGTATCGTGATGAAATGACGAAATCTGAAATCAAACTTACAAAACAAATTTATATGGCCCTTGTTAATGCATATGCAGCTTGTGGCGAATTCGAGGAGGCAAAAAAGGTAGTTGATGATCAAAGCACATCGAAGAGCTTGAATGAAATCAAGAGTGTCCTTGTCTCAGCTCTTGCATCTCATGGGCGATTGTCTGAGGCACTTGTTATCTATAAGGAGATCAAGAAAGCTGGTCACAACTTGGAGCCAAAAGCTGTTATAAGTCTCATTGATGCGATGCGTTATCGAAGTGGAGAGTTGGACAGGTTGCTTCTTCTACTCATGGATTTAAGTGATCAAAACTACTGGGTTGACGGTTGTTTCAGGGTTATTCAGTACTGTGTTCAGAACAATCATTTAAGTACCACTGTTGACCTGTTGAAGCAACTCAAGGATACTTTCGAAAGTGATGAAACAATGACAGAAGTTCTTTTCGATGCAGCGTATTCTCTAATTGCGGGATGCGAGTCCACACGTTTGCAGTTTGGCCTGGATTTGCTTTGGGCAATCAAGGATGAGCTTGGCCTTGTTCCGTCAAGGCAGTGTCTTGATTTTCTCCTAAGAGCTTGTGCCATTTCAGGAGATTTGAATAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCTTACAATGTATTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCAGGAGATCACAGATCTGCTGACTTTATACTCAAGAAAATTCCAAGAGATGACGCTGATGTTTGTTCTATCATCTTAGAATGTCAAAAAACTTACGGCGATAATGTTAAATCAGGTGAAAATGTTAAATCAGTAGAAGGGGATAAGAAGAAAAAGAGTCCTAAATCTGTAGGAGAGGACAAGAAGAAGAAAGAGAAGAAGAAAAAGAAAAAGAAAAAGAAAGAAACAGGAAAGAAAGAAAATAGTAAGGTTTGA 2622 0.3848 MRAPISRKLCTLSSNILSHLQNNAKKNLSSIKISPHYEETHHHFHSDLNLSTLKHNHVPPPDEEEDLSGSDFQLSGILTSSSAEKVDCEGVDDEEKEKRVVEIPLIRDIHHCDLSKKRNESSRERKHKWIFKDTGGERSDRLLKICAKKLGTTTTVDVFGYLGRETGVKEYNGLIKLCIKKVRETNDENVCIEEMNKIYNLLKLMRECGFQIEEQTYRPLFEYIIDMGFVQEFELFYDVIKAGNPSSISRLGYYEMLLWMRVNNEEMIRDICEYITVEESKDTSALRESYLLALCESDRKTQILDVLKNIDITKLKSAKSISNIFQSLGRLLLESEAESLLLDLRACDYGADKISNFIASYAVSIPNLEVEDMVLKIENLHDVLEVLLSSSAYEKLILYCCGMHKVDVALDIVDKMCQAGFELSTHVLQSILQICEEAYDYILVHRICSIIRCHHHYLQLNGDICRCLVHFCVRLKDFERAYKMVNELHELGFKPTTAMYNAIMAGYFREKNISGALRVLKHMQEANVKPDSQTFSYLIGNCETKDDINMYRDEMTKSEIKLTKQIYMALVNAYAACGEFEEAKKVVDDQSTSKSLNEIKSVLVSALASHGRLSEALVIYKEIKKAGHNLEPKAVISLIDAMRYRSGELDRLLLLLMDLSDQNYWVDGCFRVIQYCVQNNHLSTTVDLLKQLKDTFESDETMTEVLFDAAYSLIAGCESTRLQFGLDLLWAIKDELGLVPSRQCLDFLLRACAISGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSADFILKKIPRDDADVCSIILECQKTYGDNVKSGENVKSVEGDKKKKSPKSVGEDKKKKEKKKKKKKKKETGKKENSKV* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2589 873 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 530 IPR002885 -
Mtr4g2589 873 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Mtr4g2589 873 PANTHER OS02G0132600 PROTEIN 7 852 - -
Mtr4g2589 873 PANTHER OS02G0132600 PROTEIN 7 852 - -
Mtr4g2589 873 Pfam Pentacotripeptide-repeat region of PRORP 393 539 IPR033443 -
Mtr4g2589 873 MobiDBLite consensus disorder prediction 830 850 - -
Mtr4g2589 873 Gene3D Tetratricopeptide repeat domain 671 873 IPR011990 GO:0005515
Mtr4g2589 873 Gene3D Tetratricopeptide repeat domain 550 670 IPR011990 GO:0005515
Mtr4g2589 873 Gene3D Tetratricopeptide repeat domain 140 455 IPR011990 GO:0005515
Mtr4g2589 873 Gene3D Tetratricopeptide repeat domain 456 549 IPR011990 GO:0005515
Mtr4g2589 873 TIGRFAM PPR: pentatricopeptide repeat domain 499 532 IPR002885 -
Mtr4g2589 873 TIGRFAM PPR: pentatricopeptide repeat domain 465 496 IPR002885 -
Mtr4g2589 873 MobiDBLite consensus disorder prediction 851 867 - -
Mtr4g2589 873 MobiDBLite consensus disorder prediction 825 873 - -
Mtr4g2589 873 Pfam PPR repeat 567 588 IPR002885 -
Mtr4g2589 873 Pfam PPR repeat 602 627 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2589 Mtr-Chr4 39413711 39426026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2589 468 803 Glycosyltransferase AT1G05670 19.429 1.11e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2589 - - mtr:MTR_4g081220 1620.14