Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2574 ATGAGTGATCACAATACAGAAAGAAAGATGAGAAGAGAGTGTCATCCATTGTTGAGTGGTGTGAGAGAGAATAGCAAATACAAACATGGATTTTCTGTAGCTGAGATGGAGTCACTCACAAGCATATGTGAAGTTGTGTTGCCTTCATTGCCAATGGATGATGCTCTTACAAAAGATGATGAATCAAGCAAGGATGTGCAGTCTTTCTTCAACATCTCTGCTTCTATGTATCCAATCCCTGACGAGGTTGCTGAGATGCTAGTGAAGAGCGGTGTAACAGAAGCAGTAATATTGATAAGGGTGATTCTATGGCTTCTGGCAACGAGGTTGGGCACTTTATTGATTTGTGGTTTGCTCTGTCTTAGCAAGAAATGGCCATTTATCAACAACTTCTCAAGCTTGTCTTTGGATAAAAGAGAAAAGATTGTGCAGAGGGCTCTCAAGCTTAGGTTCCTCACTCCTTTTAGACTCGCATTCGCTTACATCAAAGTCCTATGTCTCTTTGTTTTCTTCTCTTGGGTTGATGAAAATGGTGATAATCCAGCATGGAAAGCCATTGGATATGAGGTATCAACAGCTGATGAGAAAATGACCAATGACACCAAAAAGAGACCCCTTGAAAAAGGAATTATAGAAATCATGCATGAACATGACACAACTCTTCAACAATCTCTATCTAACAAAGGCCTCAATGTTACACTTGACTCCAAAAACAACATCCTCAAAATCAAATGTGATGCAGTAGTTGTTGGTTCTGGCTGTGGAGGAGGTGTAGCAGCTTCTGTCCTATCAAAAGCTGGCTACAAAGTGGTTGTTCTCGAGAAAGGAAACTATTTTGTTCCCAAAGATTATTCATCTCTAGAAGGTCCTTCAATGGACCAACAATATGAAAAAGGAGGTATGTTAGCTTCTGTTGATTCAAGAATAGTTCTTTTTGCAGGTTCAACAGTAGGTGGTGGTTCAGCTGTGAATTGGTCAGCATGCATAAGAACACCACAGAATGTGTTAAAAGAATGGTCAGATGAACACAAACTTCCCCTCTTTGAAACCTTAGAGTATCTATCTGCTATGGAAACCGTGTGTGAGAGGATTGGTGTCAATGAAAATTGTACACAAGAAGGATTCCAAAATCAAGTATTAAGAAAAGGGTGCCAAAATCTTGGCTTAAAAGTTGATTATGTGCCAAGAAATTCACCAGGGAATCATTATTGTGGTTCATGTGGTTATGGTTGTCCAAAAGGTGAGAAACAAGGGACTCAAGCTACATGGCTTGTAGATGCTGTTGATAAAGGTGCTGTGATAATAACAGGATGCAAAGCTGAGAGATTCTTGTTTGATAATAATTATAAGAATGCCAATACCAGAAAGAAGAAGAAATGTTTGGGAGTGTTGGCCAAGACTTTAAACAGTAGAGTCACAATGAAGCTACAGATTGAGGCCAAAGTGACAATTTCTGCAGGTGGGGCAATTCTTACACCACCATTATTGATCTCTAGTGGTTTAAAGAACAAAAACATTGGTAGGAATCTTCATCTCCATCCTGTACTAATGACATGGGGATACTTTCCAGAATCAAAATCAGATCTCAAAGGTAAAATCTACGAGGGAGGTATAATCACATCTGTCCACAAAGTATCTTCATCATTAAATGATCATTCAATATCAGATACAAGAGCAATAATTGAGACACCATTACTAGGACCATCATCATTTGCATCAATATATCCATGGGAATCAGGACTTGACTTCAAACAAAGAATGCTAAAATATCCAAGAACAGCACACTTAATCACAATAATAAGAGACAAAGCAAGTGGACAAGTAAAAACAGAGGGAAGAATCAGCTACAAATTGAATTCAATTGACAGAGAGAATATGAGAGCTGGTTTACAACAAGGACTAAGAATTCTAATAGCAGCAGGAGCAGTTGAAGTAGGAACACACAGAAGTGATGGTCAGAGAATTAAGTGTAATGAGAACACTGGCGAAAAGGAAATTGAAGAGTTTATAGATAGTGTTTATCCAATGGAAGGAGCATTGTGGCCAGGTGAGAATTGGAATTTGTATACTTCTGCTCATCAAATGGGGAGTTGTAGAATGGGAGTGAATGAAAAGGAAGGTGCTGTTGATGAAAATGGTGAGAGTTGGGAAGCTGAAGGGTTGTTTGTTTGTGATGCTAGTGTTCTTCCAACTGCTGTTGGTGTTAATCCTATGATCACTATTCAATCAACTGCATTTTGTATTTCAAATAGGATTGTAGATTTTCTTCGAAAGGGGCAAGAATCAAAAGATTGTTGA 2298 0.3864 MSDHNTERKMRRECHPLLSGVRENSKYKHGFSVAEMESLTSICEVVLPSLPMDDALTKDDESSKDVQSFFNISASMYPIPDEVAEMLVKSGVTEAVILIRVILWLLATRLGTLLICGLLCLSKKWPFINNFSSLSLDKREKIVQRALKLRFLTPFRLAFAYIKVLCLFVFFSWVDENGDNPAWKAIGYEVSTADEKMTNDTKKRPLEKGIIEIMHEHDTTLQQSLSNKGLNVTLDSKNNILKIKCDAVVVGSGCGGGVAASVLSKAGYKVVVLEKGNYFVPKDYSSLEGPSMDQQYEKGGMLASVDSRIVLFAGSTVGGGSAVNWSACIRTPQNVLKEWSDEHKLPLFETLEYLSAMETVCERIGVNENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSPGNHYCGSCGYGCPKGEKQGTQATWLVDAVDKGAVIITGCKAERFLFDNNYKNANTRKKKKCLGVLAKTLNSRVTMKLQIEAKVTISAGGAILTPPLLISSGLKNKNIGRNLHLHPVLMTWGYFPESKSDLKGKIYEGGIITSVHKVSSSLNDHSISDTRAIIETPLLGPSSFASIYPWESGLDFKQRMLKYPRTAHLITIIRDKASGQVKTEGRISYKLNSIDRENMRAGLQQGLRILIAAGAVEVGTHRSDGQRIKCNENTGEKEIEEFIDSVYPMEGALWPGENWNLYTSAHQMGSCRMGVNEKEGAVDENGESWEAEGLFVCDASVLPTAVGVNPMITIQSTAFCISNRIVDFLRKGQESKDC* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2574 765 Pfam GMC oxidoreductase 246 515 IPR000172 GO:0016614|GO:0050660
Mtr4g2574 765 Pfam GMC oxidoreductase 610 746 IPR007867 GO:0016614
Mtr4g2574 765 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 10 758 - -
Mtr4g2574 765 PIRSF Lg_Ch_AO 18 762 IPR012400 GO:0046577
Mtr4g2574 765 Gene3D - 230 558 IPR036188 -
Mtr4g2574 765 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 10 758 - -
Mtr4g2574 765 Gene3D - 685 762 IPR036188 -
Mtr4g2574 765 SUPERFAMILY FAD/NAD(P)-binding domain 243 759 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2574 Mtr-Chr4 39272805 39279727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2574 9 757 Acyl Lipid Metabolism Gene Families AT4G28570 57.029 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2574 K17756 - gmx:100776182 1171.38