Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2501 ATGGATTCATCATCTCCTTTACACATAGCAATGTATCCATGGTTTGCAATGGGCCACCAAACTCCATTCCTTCATCTAGCAAACAAACTAGCAAAAAAAGGTCACAAAATCACTTTTTTCACACCTAAATCAGCACAATCCAAATTAGAACCATTCAATCTCTACCCACAATTAATCACTTTTATCACCATCAAAGTTCCTCATGTTGAAGGTCTCCCTCTCAATGCAGAAACAACAGCTGATGTCCCTTATCCTTTACATCCACACATCATGACAGCCATGGACCTTACTCAACCTGACATTGAAACTCATCTCACAAATCTCAAACCTCAAATTGTTTTCTATGATTTCACTCATTGGATTCCATCTTTAACCAAACGTTTAGACATCAAAGCTTTTCATTATTGCATTATTAGTTCAATCATGATTGGTTACACTCTAGCACCATCTAGATATTCAAAGGGAAAAGATTTAACCGAATTTGATCTAATGCAACCTCCTTCTGGTTACCCTGGTTCATCTATCAAGCTTCATAGTCATGAAGCAAAAGCTTTCGCTGCTATGAGGAAAAACACTTATGGTAGCAATGTACTTTTCTATGATCGACAAGCCATTGCTTTAAATGAAGCTGATGCATTAGGATACAAAACATGCAGAGAAATTGAAGGACCTTATCTTGATTACATACAGAAACAGTTTAACAAACCGGTTCTTACTTCAGGACCAGTTTTACCGATACTTGAAAACTCAAATTATGTTTTGGATGAAAATTGGGCTACTTGGCTTGGTAGATTCAAAACGGATTCAGTTGTTTATTGTTGTTTTGGAAGTGAATGTGTTTTAAAGCCAAATACATTTCAAGAACTGATGCTTGGTCTTGAGTTGACTGGTATGCCATTTTTTGCAGCTTTGAAACCTCCTTTTGGTTTCGAAACAATTGAAGAAGCATTGCCAGAAGGGTTTTCAGAAAGGGTTGAAGGAAGAGGTGTTGTTTATGGTGGTTGGGTTCAACAACAATTGATTTTGGAACATCCTTCTGTGGGATGTTTCATTACACATTGTGGTTCAGGTTCTTTATCAGAGGCATTAGTGAATAAGTGTCAATTGGTTTTGTTGCCAAATGTTGGTGACCAGATATTGAATGCTAGGATGATGGGAAACAACTTGAAAGTTGGTGTGGAAGTTGAGAAAGGTGAAGATGGATTCTATACTAAGGATAATGTTTGCAAAGCTGTGAGCATTGTGATGAATGATGAGGATGAAATTAGTAAGACAGTAAGGTCTAATCATACTAAGATTAGAGAGATGTTGCTTAATAAAGATCTTGAGTCATCTTATATTGATAACTTCTGCATGAAGCTTCAAGAGATTGTTGAGGGAAAGAATTAA 1389 0.3665 MDSSSPLHIAMYPWFAMGHQTPFLHLANKLAKKGHKITFFTPKSAQSKLEPFNLYPQLITFITIKVPHVEGLPLNAETTADVPYPLHPHIMTAMDLTQPDIETHLTNLKPQIVFYDFTHWIPSLTKRLDIKAFHYCIISSIMIGYTLAPSRYSKGKDLTEFDLMQPPSGYPGSSIKLHSHEAKAFAAMRKNTYGSNVLFYDRQAIALNEADALGYKTCREIEGPYLDYIQKQFNKPVLTSGPVLPILENSNYVLDENWATWLGRFKTDSVVYCCFGSECVLKPNTFQELMLGLELTGMPFFAALKPPFGFETIEEALPEGFSERVEGRGVVYGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGNNLKVGVEVEKGEDGFYTKDNVCKAVSIVMNDEDEISKTVRSNHTKIREMLLNKDLESSYIDNFCMKLQEIVEGKN* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2501 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 439 - -
Mtr4g2501 462 CDD GT1_Gtf-like 7 419 IPR002213 GO:0008194
Mtr4g2501 462 ProSitePatterns UDP-glycosyltransferases signature. 335 378 IPR035595 -
Mtr4g2501 462 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 334 419 IPR002213 GO:0008194
Mtr4g2501 462 PANTHER GLYCOSYLTRANSFERASE 3 457 - -
Mtr4g2501 462 Gene3D Glycogen Phosphorylase B; 1 259 - -
Mtr4g2501 462 Gene3D Glycogen Phosphorylase B; 260 439 - -
Mtr4g2501 462 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 3 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2501 Mtr-Chr4 38567547 38568966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2501 2 459 Glycosyltransferase AT5G54060 49.138 3.36e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2501 K22794 K12933 gmx:100787444 708.753