Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2500 ATGGCATCATCATCTCCTTTACACATAGCAATGTATCCATGGTTTGCAATGGGCCACCAAACTCCATTCCTTCATCTAGCAAACAAACTAGCAAAAAAAGGTCACAAAATCACCTTTTTCACACCTAAATCAGCACAATCCAAATTAGAACCATTCAATCTCTACCCACAATTAATCACTTTTATCACCATCAAAGTTCCTCATGTTGAAGGTCTCCCTCTCAATGCAGAAACAACAGCTGATGTCCCTTATCCTTTACATCCACACATCATGACAGCCATGGACCTTACTCAACCTGACATTGAAACTCATCTCACAAATCTCAAACCTCAAATTGTTTTCTATGATTTCACTCATTGGATTCCATCTTTAACCAAGCGTTTAGGCATCAAAGCTTTTCATTATTGCATTATTAGTTCAATCATGGTTGGTTATAGTCTAACACCAGCTAGATATTCACAGGGAAACAATTTAACTGAATTTGATCTCATGCAACCACCTTATGGTTACCCAGATTCTTCTATCAGGCTTCATAGTCATGAAGCAAAAGCTTTGGCTGCTATGAGGAAAAACACTTTTGGTAGCAATGTACTTTTCTATGATCGACAAGCTATTGCCTTAAATGAAGCTGATGCATTAGGATACAGAACATGCAGAGAGATTGAAGGACCTTATCTTGATTACGTACAAAAACAATTTAATAAATCAGTTCTTACTTCAGGACCAGTGCTACAGATACTTGAAAATCCAAATTATGTTTTGGATGAAAAGTGGGCTACTTGGCTTGGTGGATTCAAAGCAGATTCTGTTGTTTATTGTTGTTTTGGAAGTGAATGCACTTTAATACCAAACCAATTTCAAGAATTAATTCTTGGTCTTGAGTTATCTGGTATGCCGTTTTTTGCAGCTTTGAAACCTCCTTTTGGTTTTGCAACAATTGAAGAAGCATTACCAGAAGGATTGGCAGAGAGGATTAAAGGAAGAGGTGTTGTTTATGGTGGTTGGGTTCAACAACAATTGATTTTGGAACACCCTTCTGTGGGGTGCTTCATTACACATTGTGGTTCAGGCTCTTTGTCTGAAGCATTGGTGAATAAGTGTCAATTGGTTTTGTTGCCAAATTTTGGTGACCGGATATTGAATGCTAGGATAATGGCAAATAACTTGAAAGTTGGTGTGGAAGTTGAGAAAGATGAAGATGGATTATATACTAAGGATAGTGTTTGTAAAGCTGTGAGCATTGTGATGGATGATGAAAATGAAACTAGTAAGACAGTAAGAGCTAATCATGCCAAGATTAGAGAGATGTTACTGAATAAGGATCTTGAGTCATCTTATATTGATAATTTCTGCAAGAAGCTTCAAGAGATTGTTGAGAAAAAGAATTAA 1389 0.3686 MASSSPLHIAMYPWFAMGHQTPFLHLANKLAKKGHKITFFTPKSAQSKLEPFNLYPQLITFITIKVPHVEGLPLNAETTADVPYPLHPHIMTAMDLTQPDIETHLTNLKPQIVFYDFTHWIPSLTKRLGIKAFHYCIISSIMVGYSLTPARYSQGNNLTEFDLMQPPYGYPDSSIRLHSHEAKALAAMRKNTFGSNVLFYDRQAIALNEADALGYRTCREIEGPYLDYVQKQFNKSVLTSGPVLQILENPNYVLDEKWATWLGGFKADSVVYCCFGSECTLIPNQFQELILGLELSGMPFFAALKPPFGFATIEEALPEGLAERIKGRGVVYGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNFGDRILNARIMANNLKVGVEVEKDEDGLYTKDSVCKAVSIVMDDENETSKTVRANHAKIREMLLNKDLESSYIDNFCKKLQEIVEKKN* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2500 462 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 316 419 IPR002213 GO:0008194
Mtr4g2500 462 ProSitePatterns UDP-glycosyltransferases signature. 335 378 IPR035595 -
Mtr4g2500 462 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 3 457 - -
Mtr4g2500 462 Gene3D Glycogen Phosphorylase B; 2 258 - -
Mtr4g2500 462 Gene3D Glycogen Phosphorylase B; 259 439 - -
Mtr4g2500 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 443 - -
Mtr4g2500 462 CDD GT1_Gtf-like 7 448 IPR002213 GO:0008194
Mtr4g2500 462 PANTHER GLYCOSYLTRANSFERASE 3 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2500 Mtr-Chr4 38550026 38551772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2500 5 462 Glycosyltransferase AT5G54010 45.852 1.41e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2500 K22794 - gmx:100780270 723.005