Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2438 ATGGCTTCAAAATCAAGTACTAGATCAAAACCATCCGACAATTCCAACAAAGCACCACCGGCAACACCAAAAGTAAGTAAAGTTAGCAAACCAGTGACCAAATCAGCATCTGAGTCGCCATCTCCGTTGCAAAATTCACGTCTTTCTGTTGAAAAATCGCCACGATCTGTGAATTCAAAGCCCGCTGTTGAGCGGAAATCAGCAAAAGCTACCGCCACCCCACCTGATAAACAAGCTCCAAGAGCTGCAAAGGGTTCAGAGTTGCAGAATCAGTTGAATGTAGCTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGATCCTTCAGGCTGAGAAGGAGAAGGTAAAAGCTATTGATGAGTTGAAAGAAGCACAAAGAGTGGCCGAGGAAGCAAATGAGAAGCTCCAGGAAGCATTGGTGGCTCAAAAGCAGGCTAAAGAGGAATCCGAGATTGAAAAATTCCGAGCTGTTGAATTGGAACAGGCTGGAATTGAGACTGTGAATAAGAAGGAAGAAGAATGGCAAAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCCTTGGATGTGGCCAGTCTTGCCTCAACCACTGAGGAGCTTGAGCGGGTTAAACAAGAACTCACCATGATGTGCGATGCTAAAAACCAGGCATTAAATCATGCTGATGATGCAGCTAAAGTTGCCGAGGTTCATGCTGAGAAAGTAGAAATTTATGCAGCTGAATTGACGCAGTTGAAGGCCTTACTAGATTCAACACAAGAAACAAAAGCCAGTGATAATAACCTTATATTGAAGTTGAAAGCAGAGATAGAAGCTCTCAAGAAAGAACTCGATAAGGGAATGAGTTATGATGAGAGGTTGACAGAGAAAGAAACTAAGATTGAACAGCTTAATGTAGAACTTGAAACCTCAAGGATGGCTGAATCTTATGCAAACAGTCTGCTAGAGGAGTGGAAAAAGAAGGTTGAGGAACTAGAAATGAGGGTTGAAGAATCAAACAAGTTGGAGAGATCTGCATCAGAATCCTTGGAATCTGTAATGAACCAGCTAGAAGAAAGCAATTATCTGTTGCATGACGCAGAATCTGTAGCTGCTTCTCTTAAAGAGAAGGTGGGATTGTTAGAAATGACAATTGTGAGACAAAAAGCCGATCTTGAGGATTCAGAACGCCGTCTTCTTATGGCCAAGGAAGAAAATCTTGAAAAGTCAAAGAAGGTTGAGGCTCTTGAATCCGAACTTGAGACAGTTAAGGAAGAAAAAGATCAGGCTTTGAACAATGAACAGCTTGCAGCCTCTCATGTGCAGACCCTGTTAGAAGAGAAAAACAAACTCATCAATGAATTGGACAATTCTAGGGAAGAAGAAGAAAAAAGCAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCTGAATCTAGAGAAGCCAAAGAAAATTTTCTAAGCACCCAAGCTGAAAGGGAAAGCTATGAGAACCAGATTGAAGATTTGAAGTTAGTCTTAAAAGGTACCAATGAAAAATATGAGTCAATGCTTGACGAAGCGCAGCATGAAATTGATGTTCTCATAGACAGTATTGAAAATTCTAAGAATGTGTTTGAGAACTCGAAGGCTGAGTGGGATCAGAGAGAGCTTCATCTAGTCAGCAGCCTAAAGAAAACCGAAGAAGAGAATGCGGCCGCGGAAAAAGAAATAAATAGATTGGTTTATTTGCTTAAACAAACTGAGGAAGAATCTAATGCCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGACCGAGGCAATCCATCTGCAGGAAGCTCTAAAGGAAGTAACGTCTGAGAACGTGAAACTGAAGGAGAATATATTGGACAAAGAGAATGAAATGCAGAATCTTTTTCAAGAAAACGATGAACTCCGAGCTAGGGAAGCCGAATCTATTAAGAAGGTGGAGGAGTTGTCAAAGTTACTGGATGAAGCTACAACCAGAAATCACACTGAGCATGAAAATGGTGATCTTTCGGACAGTGAAAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGTCATGGATATGGAGGAGAGGAAATTCCAAAGGTTGTTGAGCTTTCCCTCAAACAGGAAGAATTCAAACATAACGTACTAGAAGAAAGTATGATCTTGAATGACAAAGCTGACGAGAAAATCGAATCTCCTAAACCTGTGAAAATGAATGGAAAACCAAAGGAAGACGAGAGCAAAGAAAAGGATGATCCAGAAGAAGTAGAATTCAAAATGTGGGAGAGTTGCACAATAGAGAAAAAGGAGTTCTCTTTCTCACCAGAGAGAGAACTTCCAGAGGCTAAATCATTGGAAGAAGAAACTGAGTCAAAGACAGAAGAAGGTGGTGATGGTGAGGGCTTTGATAAGATAAATGGAACAACTGTTATAGAGAACATTGATAATGGTGGAAGCTCACCAGTAAAAGAAGAACAACAACAACAGTTGAAGAAGAAGAAGAAAGCTTTGCTTGGAAAATTTGGAAGCTTGCTCAAGAAGAAAGGTGGTAGCAACCAAAAATAG 2577 0.4067 MASKSSTRSKPSDNSNKAPPATPKVSKVSKPVTKSASESPSPLQNSRLSVEKSPRSVNSKPAVERKSAKATATPPDKQAPRAAKGSELQNQLNVAQEDLKKAKEQILQAEKEKVKAIDELKEAQRVAEEANEKLQEALVAQKQAKEESEIEKFRAVELEQAGIETVNKKEEEWQKELESVRNQHALDVASLASTTEELERVKQELTMMCDAKNQALNHADDAAKVAEVHAEKVEIYAAELTQLKALLDSTQETKASDNNLILKLKAEIEALKKELDKGMSYDERLTEKETKIEQLNVELETSRMAESYANSLLEEWKKKVEELEMRVEESNKLERSASESLESVMNQLEESNYLLHDAESVAASLKEKVGLLEMTIVRQKADLEDSERRLLMAKEENLEKSKKVEALESELETVKEEKDQALNNEQLAASHVQTLLEEKNKLINELDNSREEEEKSKKAMESLASALHEVSAESREAKENFLSTQAERESYENQIEDLKLVLKGTNEKYESMLDEAQHEIDVLIDSIENSKNVFENSKAEWDQRELHLVSSLKKTEEENAAAEKEINRLVYLLKQTEEESNANREEEAQLKENLKEVETEAIHLQEALKEVTSENVKLKENILDKENEMQNLFQENDELRAREAESIKKVEELSKLLDEATTRNHTEHENGDLSDSEKDYDLLPKVVEFSEENGHGYGGEEIPKVVELSLKQEEFKHNVLEESMILNDKADEKIESPKPVKMNGKPKEDESKEKDDPEEVEFKMWESCTIEKKEFSFSPERELPEAKSLEEETESKTEEGGDGEGFDKINGTTVIENIDNGGSSPVKEEQQQQLKKKKKALLGKFGSLLKKKGGSNQK* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2438 858 Coils Coil 552 656 - -
Mtr4g2438 858 Coils Coil 376 424 - -
Mtr4g2438 858 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 8 856 - -
Mtr4g2438 858 Coils Coil 233 274 - -
Mtr4g2438 858 MobiDBLite consensus disorder prediction 659 679 - -
Mtr4g2438 858 Coils Coil 163 183 - -
Mtr4g2438 858 MobiDBLite consensus disorder prediction 1 56 - -
Mtr4g2438 858 MobiDBLite consensus disorder prediction 722 805 - -
Mtr4g2438 858 MobiDBLite consensus disorder prediction 722 837 - -
Mtr4g2438 858 Coils Coil 285 305 - -
Mtr4g2438 858 Pfam Weak chloroplast movement under blue light 86 520 IPR008545 -
Mtr4g2438 858 Coils Coil 432 533 - -
Mtr4g2438 858 Coils Coil 85 151 - -
Mtr4g2438 858 Coils Coil 313 333 - -
Mtr4g2438 858 MobiDBLite consensus disorder prediction 813 829 - -
Mtr4g2438 858 MobiDBLite consensus disorder prediction 1 91 - -
Mtr4g2438 858 PANTHER WEB FAMILY PROTEIN-RELATED 8 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2438 Mtr-Chr4 37988874 37993262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2438 - - gmx:100777446 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2438 4 37988874 37993262 Mtr4g2438 4 37988874 37993262 ECH