Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2430 ATGAACCCATCAACACTTTTTTACTGTCTTCTCAAAAACAAGTGGCGATTCATTTCAAGCAGTGAAAAAGAAACTCAAAACATGAGTGACAGTTTGAAGGAAAAAGTGAACGCCATAGGAGAGCGTCTCAAGATCAATGGAGCTGAGATGGGTCGAAAGATGAGTGCTGGAATAGGTACTATGAGTTTCAAGATGAAAGAGTTTTTCCAAGAACCAAACCAAGCCGAAAAACTCGTTTACGAAGCTACTTCTGAGTCTCTTGATGAGCCTAACTGGGATATGATTCTTAATATATGTGACATGGTTAATGCTGAAAAACTTTATACTTGTGATGTGGTACGTGCCATCAAGAAAAGGATCATGATGAAAAGTGTTAGAGGTCAGTATTTGGCTTTGGTTTTGCTTGAAGCGTTGGTGGAGAATTGTGACAAGGGTTTCTTTGAGGTTGCAACTGAGAGAGTTCTTGATGAAATGGTTAAGATTGTTGATGATCCTGATCAGAGTTTTGTTGCTAGTAAGGAGAAGGCTTTGATGATGATTCAGGTTTGGGGAGAGTCAAATACTGAGCTTAGATATCTACCTGTTTATGAAGAAACTTACAAGAGTTTGAAATCAAGGGGCATTCGGTTCCCTGGTCGTAACAATGAAAGCTCGGCTCCTATTTTAACTCATTATCACGCTCCCTCTGCACCAGAGATTGATCACAGTCTTGGACATCTTATTCAGCACGATACTCAGCTTGATCGCAGTCTTGCACATCTTATTCAGCGTGAAAATCCTGTGCCGAGTCTCAAGCCTGAACAAACAAAGGAAGCTTTTGATGTTGCAAGAAATAGCACTGAGCTTCTCTCTTCTGTGTTATCTTCTTCACCTCAGCAAAATGTTCTTAAGCAAGATTTGACCATTACATTAGTACAACAATGCCATCAGTCCCAATCTACCGTCCATAGAATCATTGCGACTGTTGGCGAAAATGAAGCATTGCTCTGTGAGGCCTTGAATGTAAATGATGAGATTCATAAGGTTCTCTCCAAATATGAAGAGTTGAAGAAGAAGCCTAAAGCTTCTCCACTTGAACCAGAACAGAATATGATGATACCTGTTACGATTGAACCAGATGAGTCGCCTCATTTTAGAGAAGAGGCCTTGATTAGAAAGCCAGCTTGTTCAAGAACTGGTGTTCAGGGATTGAGCCATGATGACATGATGGATGATCTTGATGAAATGATTTTTGGCAAAAAGGGTGGGGATGCATCTGAATGGAGACAAGATCCTAAGAGAACCAACAATCATCAAAATATGACTCCATCTTCTTATAAGTTATAA 1326 0.4005 MNPSTLFYCLLKNKWRFISSSEKETQNMSDSLKEKVNAIGERLKINGAEMGRKMSAGIGTMSFKMKEFFQEPNQAEKLVYEATSESLDEPNWDMILNICDMVNAEKLYTCDVVRAIKKRIMMKSVRGQYLALVLLEALVENCDKGFFEVATERVLDEMVKIVDDPDQSFVASKEKALMMIQVWGESNTELRYLPVYEETYKSLKSRGIRFPGRNNESSAPILTHYHAPSAPEIDHSLGHLIQHDTQLDRSLAHLIQRENPVPSLKPEQTKEAFDVARNSTELLSSVLSSSPQQNVLKQDLTITLVQQCHQSQSTVHRIIATVGENEALLCEALNVNDEIHKVLSKYEELKKKPKASPLEPEQNMMIPVTIEPDESPHFREEALIRKPACSRTGVQGLSHDDMMDDLDEMIFGKKGGDASEWRQDPKRTNNHQNMTPSSYKL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2430 441 MobiDBLite consensus disorder prediction 412 427 - -
Mtr4g2430 441 Pfam GAT domain 277 351 IPR004152 GO:0035091|GO:0043130
Mtr4g2430 441 CDD VHS 75 205 - -
Mtr4g2430 441 ProSiteProfiles VHS domain profile. 82 211 IPR002014 GO:0035091|GO:0043130
Mtr4g2430 441 Pfam VHS domain 73 207 IPR002014 GO:0035091|GO:0043130
Mtr4g2430 441 PANTHER TOM1-LIKE PROTEIN 1 28 432 - -
Mtr4g2430 441 SMART VHS_2 75 207 IPR002014 GO:0035091|GO:0043130
Mtr4g2430 441 PANTHER TOM1-LIKE PROTEIN 1 28 432 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mtr4g2430 441 Gene3D - 240 352 IPR038425 -
Mtr4g2430 441 SUPERFAMILY GAT-like domain 244 351 - -
Mtr4g2430 441 SUPERFAMILY ENTH/VHS domain 69 211 IPR008942 -
Mtr4g2430 441 ProSiteProfiles GAT domain profile. 264 351 IPR004152 GO:0035091|GO:0043130
Mtr4g2430 441 MobiDBLite consensus disorder prediction 412 441 - -
Mtr4g2430 441 Gene3D - 66 228 IPR008942 -
Mtr4g2430 441 Coils Coil 332 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2430 Mtr-Chr4 37916487 37919828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2430 - - tcc:18599517 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2430 4 37916487 37919828 Mtr4g2430 4 37916487 37919828 ECH