Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2427 ATGAAGCCGAAATCATTACAAATGAGCAGATCATCTTTGTCAGCATCTTCTGATGTATCTGAAGCACAGAAGCCTCCTTTACATCCAACCGTAACATTTGGCCGAAGAACTTCATCCGGTCGATACATCAGTTACTCCAGAGATGATCTTGATAGCGAGCTAGGAAGTAATGACTTCATGAACTATACAGTGCACTTACCACCCACTCCGGATAACCAACCTATGGATACCTCAATCTCGCAGAAAGTAGAGGAGCAGTATGTGTCAAGTTCTCTATTCACTGGAGGATTTAATAGTATTACCCGTGCACATCTAATGGATAAAGTTACAGAATCTGAAGTAAATCATCCACAGATGGCTGGTGCAAAAGGGTCTAAATGTGCTATTCCTGGCTGTGATTCGAAGGTGATGAGTGATGAACGTGGTGATGACATTCTTCCCTGTGAGTGTGATTATAAGATATGTAGAGATTGCTATATAGATGCAGTGAAAATAGGAGATGGGATGTGCCCAGGATGTAAAGAGCCATATAAGAACACAGAGCTTGATGAAGTGGCTGTGAATAATGGAGGGCCACTTCCACTTCCTCCACCAAATGGGGGGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCGACAAAGTCTGCGCTGATGAGAAGTCAAACTGGAGACTTTGATCACAATCGATGGTTGTTTGAAACAAAGGGGACATATGGTTATGGTAATGCAATATGGCCAAAGGAAGGAGATTTCGGAAATGGAAAAGATGGCGATGTTTCTGAGCCAACTGAATTGATGAGCCGACCATGGAGGCCACTAACAAGGAAGTTGAAGATACCTGCTGCTGTTCTCAGCCCATATCGTCTCATCATTTTTATCCGTTTGGTTGCTCTTGTGTTGTTCCTGCACTGGAGGGTCACACACAAAAATACCGATGCAGTCTGGTTATGGGGCATGTCTATAGTTTGTGAATTATGGTTTGCTTTCTCTTGGCTTCTTGATCAACTGCCCAAGCTATGCCCAGTAAATCGTTCTACAGATCTTAATGTTCTGAAGGAAAAATTTGAATCACCAAGTCCTAACAATCCTACAGGAAAGTCTGATCTGCCAGGCATAGATATCTTTGTTTCAACTGCTGATCCTGAGAAAGAACCACCACTTGTCACAGCAAACACCATCTTGTCGATTTTAGCTGCTGACTATCCAGTTGAGAAGCTTTCTTGCTATGTTTCTGATGATGGGGGTGCACTTTTAACTTTTGAGGCAATGGCTGAGGCTGCTAGCTTTGCCAATAACTGGGTTCCATTCTGCCGCAAACATGATATAGAGCCTAGGAATCCTGAATCATACTTCAACTTAAAGAGAGATCCTTACAAAAACAAAGTGAAACCTGATTTTGTGAAGGATCGTAGAAGGCTGAAGCGTGAGTATGATGAGTTCAAGGTTAGAATCAATGGTTTGCCCGACTCTATCCGTCGCAGGTCAGATGCTTTTCATGCAAGAGAGGAAATCAAGGCCATGAAACATCAGAGACAAAATAGGGGTGATGAACCTGTTGAGCCTATAAAGGTTCAAAAAGCAACATGGATGGCTGATGGATCTCATTGGCCAGGGACTTGGTTGAACACTTCGCCTGAGCACTCAAGGGGTGACCATGCTGGCATAATTCAGGTGATGCTGAAACCTCCAAGTGACGAACCTCTTATTGGAAATGCTGATGATGCAAAGCTTATTGACCTGACCGATGTTGATATCCGTCTTCCCCTTCTTGTTTATGTTTCTAGAGAGAAACGTCCAGGTTACGATCACAACAAAAAAGCTGGGGCCATGAATGCATTGGTTAGAGCCTCGGCTGTCATGTCCAACGGTCCCTTTATACTTAACCTCGACTGTGATCACTATATATACAACTCCAAAGCAATGAGGGAAGGTATGTGCTTTATGATGGATCGTGGTGGTGATCGCCTCTGCTATGTCCAATTCCCTCAAAGGTTTGAGGGTATTGATCCCTCTGATAGATATGCTAATCACAACACCGTCTTCTTTGATGTTAACATGAGAGCCCTTGATGGACTTCAAGGCCCAGTCTATGTAGGAACCGGCTGTCTGTTTAGAAGGTTTGCTCTTTATGGTTTTGATCCTCCACGCGCCAAAGAAGACCGCGCATCTTTCTGTAGTTGTTGCTTTGGACGCAATAAGAAGAAGCATGCCAACACCTCAGAAGAGAACAGGGCACTAAGGATGGGTGACGACTCTGACGATGAAGAGATGAATCTATCACAATTCTCCAAGAAATTTGGGAACTCAAATATCCTTATTGACTCAATTCCAGTGGCACAGTTCCAAGGTAGGCCACTTGCTGATCATCCTGCTGTGAAAAATGGACGCCCTCCTGGTGCTCTCACCATACCTCGTGAGCTGCTTGATGCATCTACTGTGGCAGAAGCCATCAGTGTGATTTCATGTTGGTATGAGGACAAGACTGAGTGGGGACAGCGTGTTGGATGGATCTATGGATCAGTTACTGAGGATGTGGTCACTGGTTATAGGATGCATAATAGAGGATGGAAGTCAGTTTACTGTGTAACTAAACGTGACGCCTTCCGTGGAACTGCTCCCATCAATCTCACTGATAGGTTGCATCAGGTTCTTAGATGGGCTACTGGCTCAGTTGAGATATTCTTCTCTAAAAACAATGCAATTATGGCCACCCGAAGAATGAAATTTCTTCAGAGGATAGCATACCTTAATGTTGGAATTTATCCATTCACTTCGTTTTTTCTTATTGTCTATTGCTTCCTGCCTGCACTCTCCCTCTTCTCTGGACAGTTCATTGTCCAAACACTCAATGTCACTTTTTTGGCTTACCTCTTGGCTATTACTGTGACTTTGTGCATTCTTGCTGTGCTTGAAATTAAGTGGTCAGGAATTGAGCTGGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACTAGTGCACATCTAGCTGCCGTGCTTCAAGGTTTACTCAAAGTTGTTGCAGGCATTGAAATCTCATTCACATTGACTTCAAAATCTGGCGGTGATGATGTTGACGACGAGTATGCTGATCTGTATATTGTCAAATGGTCATCCCTTATGATACCACCAATTGTAATCATGATGGTGAACTTAATAGGAATAGCTGTTGGAGTTAGCAGAACCATATACAGTACCATACCACAGTGGAGCCGTTTACTAGGCGGTGTTTTCTTCAGCTTTTGGGTCTTGGCTCATCTCTATCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGGAGGACACCCACCATTGTTTTTGTATGGTCGGGTCTGATAGCAATCATTATATCACTCCTCTGGGTGGCTATCAATCCACCAGCCGGTACAGACCAAATAGGCGGTTCATTCCAGTTCCCATGA 3429 0.4377 MKPKSLQMSRSSLSASSDVSEAQKPPLHPTVTFGRRTSSGRYISYSRDDLDSELGSNDFMNYTVHLPPTPDNQPMDTSISQKVEEQYVSSSLFTGGFNSITRAHLMDKVTESEVNHPQMAGAKGSKCAIPGCDSKVMSDERGDDILPCECDYKICRDCYIDAVKIGDGMCPGCKEPYKNTELDEVAVNNGGPLPLPPPNGGSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGDFGNGKDGDVSEPTELMSRPWRPLTRKLKIPAAVLSPYRLIIFIRLVALVLFLHWRVTHKNTDAVWLWGMSIVCELWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFESPSPNNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANNWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRLKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKHQRQNRGDEPVEPIKVQKATWMADGSHWPGTWLNTSPEHSRGDHAGIIQVMLKPPSDEPLIGNADDAKLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRFALYGFDPPRAKEDRASFCSCCFGRNKKKHANTSEENRALRMGDDSDDEEMNLSQFSKKFGNSNILIDSIPVAQFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAIMATRRMKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLAYLLAITVTLCILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLTSKSGGDDVDDEYADLYIVKWSSLMIPPIVIMMVNLIGIAVGVSRTIYSTIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAIIISLLWVAINPPAGTDQIGGSFQFP* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2427 1142 MobiDBLite consensus disorder prediction 1 35 - -
Mtr4g2427 1142 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Mtr4g2427 1142 SUPERFAMILY RING/U-box 113 181 - -
Mtr4g2427 1142 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 580 723 IPR029044 -
Mtr4g2427 1142 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 34 1140 - -
Mtr4g2427 1142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 190 IPR013083 -
Mtr4g2427 1142 SUPERFAMILY Nucleotide-diphospho-sugar transferases 388 721 IPR029044 -
Mtr4g2427 1142 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 34 1140 - -
Mtr4g2427 1142 Pfam Cellulose synthase 373 1132 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mtr4g2427 1142 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2427 Mtr-Chr4 37892771 37898718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2427 9 1142 Glycosyltransferase AT3G03050 83.860 0.0 2012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2427 K20924 - gmx:100786644 2122.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2427 4 37892771 37898718 Mtr4g2427 4 37892771 37898718 ECH