Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2413 ATGGCCGCTGAGAAGCTCAGAGATTTGAGCTCTCCGATCGATGTTCCCTTACTAGACGCCACCGTCGCCGCCTTCTACGGCACCGGATCTAAGCAAGAGAGAAGTGCTGCTGATTCAATTTTGCGGGACTTGCAAAATAATCCTGATATGTGGCTGCAAGTCATGCATATTTTGCAGAATACTCAAAATCTCAATACCAAGTTTTTTGCATTGCAGGTTCTTGAAGGCGTAATTAAATATAGATGGAATGCCTTACCTGCCGAGCAGCGAGATGGAATGAAAAATTTCATCTCTGATATTATTGTTCAGCTTTCTAGCAACGAGGCCTCATTCCGAACGGAAAGGTTGTATGTCAACAAGCTCAACATTATATTAGTTCAGATTTTGAAGCATGAGTGGCCAGCAAGATGGCGAAGCTTTATTCCTGATCTTGTCGCAGCTGCTAAAACTAGTGAAACGATCTGTGAGAATTGCATGGCTATATTGAAACTTTTGAGTGAAGAGGTTTTTGATTTTTCAAGAGGAGAAATGACACAGCAGAAGATAAAAGAGCTTAAACAATCATTGAACAGCGAATTTCAACTCATACATGAGTTATGCTTATATGTGCTATCGGCATCCCAAAGGGCTGAGCTGATACGTGCTACACTATCCACATTGCATGCCTTCTTATCATGGATTCCCTTGGGTTATATATTTGAATCACCGCTGCTTGAGACACTCCTGAAGTTTTTCCCAGTTCCAGCATATCGAAATCTTACGCTGCAATGTTTAACAGAGGTGGCATCCCTTCAATTTGGGAATTTTTATGACGTGCAATATGTCAAGATGTATGGTATATTAATGGGCCAATTGCAGACTATACTGCCGCCTAACACAAATATCCCTGAGGCATATGCACATGGCAATAGCGAAGAACAAGCATTTATACAGAACCTGGCGCTGTTCTTCACCTCATTTTTTAAGGTTCACATCCGCATCCTGGAATCCACTCAAGAGAATATAACAACTTTGCTTTTGGGCCTTGAATATCTTATCAGCATTTCATATGTTGACGATACTGAGGTTTTTAAGGTGTGTTTGGACTACTGGAATTCCTTGGTGTCGGAGCTGTTTGAGCCACATCGAAGTTTGGATAATCCTGCAGCTACTGCAAACTTGATGGGACTTCAGGTATCATCAATGCTTCCTGGTATGGTTGATGGGCACGGTTCTCAGCTTCTCCAACGTCGGCAGCTTTATGCTGGTCCCATGTCAAAGTTGAGAATGCTTATGATCTGTCGAATGGCTAAACCCGAAGAAGTTCTCATAGTTGAAGATGAAAATGGGAATATTGTCCGTGAAACCTTGAAGGACAATGATGTTCTTGTTCAATATAAGATTATGAGGGAGACTCTTATTTACTTGGCACATCTTGACCATGATGATACTGAAAAGCAGATGCTGAGGAAATTAAGTAAACAACTCAGTGGTGAGGATTGGACCTGGAACAATTTGAATACACTTTGCTGGGCAATTGGATCTATATCTGGTTCCATGATAGAAGAGCAGGTTGGCGAAAATGAGCCATTTGTATCTGAACTTCTATCAGGCCTTCCAATCACTATTGCAGATCTTGAACCCCATCAGATACACTCCTTCTATGAATCTGTTGCTCATATGATTCAAGCAGAGTCTGATTCACAGAAGAGAGATGAATTTCTTCAGCGGTTGATGGAGCTTCCAAATCAGAAATGGATGGAAATTATAGGCCAGGCACATCAAAATGTTGACTTTTTGAAGGATCAAGATGTAATACGGACTGTGCTTAATATATTGCAGACGAATACAAGTGTTGCATCTTCTTTAGGGACATTTTTCCTGCCCCAAATCACGATGATCTTTTTGGACATGTTGAATGTGTACAGAATGTACAGTGAGCTTATTTCTAAAAGTATTTTAGAAGGGGGGCCTTATGCATCCAAAACATCCTATGTGAAACTTCTACGTTCGGTTAAGAGGGAGACACTTAAATTGATCGAGACATTCTTGGATAAGGCTGAAGATCAACCACAGATTGGAAAACAATTTGTGCCGCCAATGATGGATCCTGTTCTGGGAGATTATGCTAGGAATGCTCCTGATGCAAGGGAATCAGAGGTTTTGTCCCTTTTTGCCACAATAGTAAACAAATATAAAGCTACAATGATTGAAGATGTACCTCGCATATTTGAAGCTGTTTTTCAGTGCACATTAGAGATGATTACAAAAAACTTTGAAGATTACCCTGAGCACCGGCTTAAGTTCTTCTCTCTTCTCCGTGCCATAGCTACCCATTGTTTTCCTGCACTGATCTGTTTGTCAAGCCAGCAATTGAAGCTTGTTATGGATTCAATCATGTGGGCATTTCGGCACACAGAAAGGAATATTGCTGAAACAGGCCTGAACCTGTTGTTGGAGATGCTGAAGAAGTTTCAGGGTTCTGAGTTCTGTAATCAGTTCTACCGGACATACTTCTTGACAACTGAGAATGAGATATTTGCTGTTTTGACCGATACTTTTCATAAGCCTGGGTTCAAATTACATGTCCTGGTGCTTCAGCATTTGTTTTGTCTGCTAGAAACTGGTGTGCTAACTGAGCCCCTTTGGGATGTTGCTACAAGTCCACAGTCATACCCAAGTAATGCAGTTTTTGTACTTGAGTATACTATAAAGCTTCTAAGTGCTTCTTTTCCGAACATGACAACAGCTGAGGTTACCCAATTTGTTAATGGACTATTTGAGTCTACAAATGATCTCTCCACATTTAAAACCCATATACGAGATTTTCTGATACAGTCAAAAGAATTTTCAGCTCAGGATAACAAAGATCTCTATGCTGAAGAGGCTGCGGCTCAGAGAGAAAGAGAACGGCAAAGAATGCTTTCTATTCCAGGGCTGATTGCCCCAATCGAGTTGCAAGATGAAATGGTGGACTCATAG 2961 0.4107 MAAEKLRDLSSPIDVPLLDATVAAFYGTGSKQERSAADSILRDLQNNPDMWLQVMHILQNTQNLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDIIVQLSSNEASFRTERLYVNKLNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPVPAYRNLTLQCLTEVASLQFGNFYDVQYVKMYGILMGQLQTILPPNTNIPEAYAHGNSEEQAFIQNLALFFTSFFKVHIRILESTQENITTLLLGLEYLISISYVDDTEVFKVCLDYWNSLVSELFEPHRSLDNPAATANLMGLQVSSMLPGMVDGHGSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMIEEQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLMELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDMLNVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIMWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTTENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLTEPLWDVATSPQSYPSNAVFVLEYTIKLLSASFPNMTTAEVTQFVNGLFESTNDLSTFKTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2413 986 Pfam CRM1 / Exportin repeat 3 491 517 IPR040485 -
Mtr4g2413 986 Pfam Importin-beta N-terminal domain 39 103 IPR001494 GO:0006886|GO:0031267
Mtr4g2413 986 SMART IBN_N_2 37 103 IPR001494 GO:0006886|GO:0031267
Mtr4g2413 986 ProSiteProfiles Importin-beta N-terminal domain profile. 37 103 IPR001494 GO:0006886|GO:0031267
Mtr4g2413 986 PANTHER EXPORTIN 1A-RELATED 517 986 - -
Mtr4g2413 986 PANTHER EXPORTIN 1A-RELATED 4 517 - -
Mtr4g2413 986 SUPERFAMILY ARM repeat 622 944 IPR016024 -
Mtr4g2413 986 Pfam Chromosome region maintenance or exportin repeat 337 372 IPR041123 -
Mtr4g2413 986 SMART CRM1_C_2 623 945 IPR014877 GO:0005049
Mtr4g2413 986 SUPERFAMILY ARM repeat 22 934 IPR016024 -
Mtr4g2413 986 Gene3D - 1 969 IPR011989 -
Mtr4g2413 986 Pfam CRM1 / Exportin repeat 2 410 477 IPR041235 -
Mtr4g2413 986 Pfam Exportin 1-like protein 115 258 IPR013598 -
Mtr4g2413 986 PANTHER EXPORTIN 1/5 517 986 IPR045065 GO:0005049|GO:0006611
Mtr4g2413 986 PANTHER EXPORTIN 1/5 4 517 IPR045065 GO:0005049|GO:0006611
Mtr4g2413 986 Pfam CRM1 C terminal 623 944 IPR014877 GO:0005049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2413 Mtr-Chr4 37716174 37728624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2413 K14290 - gmx:100813443 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2413 4 37716174 37728624 Mtr4g2413 4 37716174 37728624 ECH