Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2410 ATGGAGATGCTTGATTCCGTGTGCTTTTGTAGGAATTCTTCAATTACATTCGCTCAATCCTCTTCCCCTCTTCCTCAAATCTTTTCTCTTCCTCAACCCATTCCTCAATGGCCTCAAGGACAAGGTTTTGCCTCAGGAGTTGTAAATCTTGGTGAAATAGAAGTTTCCAAGGTCACAAGGTTTGAGTTCATTTGGAGCACTGCTATACTAAACCCGAAAAAAGCTGTTATATTCTACAAGCCTGTAGGAATACCTCACACTTTCCATATCCTTGGTCACTATTGTCAACCTAGTGACAAACCTTTACGAGGTTTTGTACTTGTCGCAAAGGAAACAAGAATTCATTTTTCCGAAACTAACGTGGAAAAGCTACCTGCTCTGAGGAATCCCCTTGATTTTGAGTTAGTTTGGAGTTCAAATGCGCCTGCCAGTCTGGAAATTTCAAGTGGGTGCGGTTACTTCTGGCTACCCGAACCTCCTGAAGGTTACAAAGCCGTTGGCTACTTAGTTACAGACAAACCTGAAAAGCCTAAGTTGGATGAAATGTGTTGTGTTCGTGCCGATCTTACTGACAAATGTGAACCTTACCATGTAAAATTTGCTGTTGCTTCTAAAATTCCAGAGTTATCATTTCAGCTATCGAGCTCGAGACCTTGTGACCGTGGCATGCTAGGGAAAGGTGTTTGTGTTGGGACTTTTCTCTGCAGTAGTGGTTTGAGCAATGGAGAAGAGAACCCTATTGCATGCTTGAAGAACTTAAATGCTGCGCTACAATCAATGCCTAATTTGCAACAAATTCATGGACTTATTAACCATTATGGCCCTACTGTTTTCTTTCACCCTGAGGAAATTTACTTGCCATCTTCTGTTGATTGGTTTTTCAGCAATGGAGCCCTTTTGTGCAGAAAGGGTATGTGTACAGGAGAGGGAATCGATGCAACTGGCTCAAATCTACCATCTGGAGGATCAAATGATGGCCAATTTTGGATAGAATTGCCGAGTGATGATCGAAGGGATTTTATCAAACGCGGGGATTTAAATAGTGCAAAGCTTTATGTTCATGTGAAGCCGGCTCTTGGTGGGACTTTTACAGACATTGCAATGTGGATATTTTGCCCTTTCAACGGACCAGCCACTTTGAAAGTTGGAATAAAAAATATACCTTTGAGCAAGATTGGAGAGCATGTTGGTGACTGGGAGCATTTCACACTTCGTATATGTAACTTTGCCGGAGAGCTCTATAGCATATACTTCTCACAACACAGTGGCGGTGAATGGATGGACACATGTGACTTGGATTATATTGATGGAAATAAAGCCATTGTTTACTCGTCAAAAAGTGGACATGCAAGTTACCCTCGTCCTGGAACGTACATCCAAGGATCTTCAAAACTAGGGCTTGGCATTAGGAACGATGCTGTTCGTAGTAATTTGTACGTGGACTCCAGTATCCATTATGAAGTTGTTGCAGCTGAATATCTAGAAAATGTTGTCGCTGAGCCTAATTGGTTGCAGTTTATGAGAAAGTGGGGTCCCAAAATTATTTATGATTCAAAAACTGAGTTGGATAAGGTTATCAATGCACTTCCGCGCATGCTTCAGTATTCAATGAGAGACTTGATTAACAAGTTACCGGTGGAGCTCTATGGCGAGGAAGGTCCTACTGGGCCAAAAGAGAAAAATAATTGGATACATGATGAGAGATGGTGA 1710 0.4187 MEMLDSVCFCRNSSITFAQSSSPLPQIFSLPQPIPQWPQGQGFASGVVNLGEIEVSKVTRFEFIWSTAILNPKKAVIFYKPVGIPHTFHILGHYCQPSDKPLRGFVLVAKETRIHFSETNVEKLPALRNPLDFELVWSSNAPASLEISSGCGYFWLPEPPEGYKAVGYLVTDKPEKPKLDEMCCVRADLTDKCEPYHVKFAVASKIPELSFQLSSSRPCDRGMLGKGVCVGTFLCSSGLSNGEENPIACLKNLNAALQSMPNLQQIHGLINHYGPTVFFHPEEIYLPSSVDWFFSNGALLCRKGMCTGEGIDATGSNLPSGGSNDGQFWIELPSDDRRDFIKRGDLNSAKLYVHVKPALGGTFTDIAMWIFCPFNGPATLKVGIKNIPLSKIGEHVGDWEHFTLRICNFAGELYSIYFSQHSGGEWMDTCDLDYIDGNKAIVYSSKSGHASYPRPGTYIQGSSKLGLGIRNDAVRSNLYVDSSIHYEVVAAEYLENVVAEPNWLQFMRKWGPKIIYDSKTELDKVINALPRMLQYSMRDLINKLPVELYGEEGPTGPKEKNNWIHDERW* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2410 569 PANTHER - 1 569 - -
Mtr4g2410 569 Pfam Vacuolar protein sorting-associated protein 62 25 567 IPR009291 -
Mtr4g2410 569 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 1 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2410 Mtr-Chr4 37695630 37698446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2410 - - gmx:100793026 860.522