Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2406 ATGGATTGCGGCGTTGGATCCATCGTATGGGTTCGCCGGCGAAACGGCTCGTGGTGGCCGGGTCAAATTATCGGACCTGATGATCACTCCACTTCTCATCTCACTTCTCCTCCTCGTTCTGGAACTCCTGTTAAGCTTCTCGGCAGAGAAGACGCTAGCGTAGATTGGTACAATTTGGAGAAATCAAAGCGTGTGAAGGCATTCCGATGCGGTGAATTTGATGATTATATTGAAAAGATTGAAGCCTCCCATGAGATGCCGTTGAAGAAAAGAGAGAAATATGCCCGGCGTGAAGATGCTATTCTTCATGCTCTTGAACTTGAGAGGGAATTGGTGAAAAAGCAAGTGAAATTAGATAATGCTTATGATCAGAGAGATTGTAGACGGTCTAATTCGGTTAAAAAGGGTGTGGTGGTAGCATTGCCGGTGGAAACCGAGGGAAATGATGATGATGATGATGAAAAACATGCAAATTTGAAATCGTACAGATCTTGTGAAAATGAAATTGATGGAGGTTGTTTTCCGTTGGAGGTTGCAAGGGATGTGGAAGTAGATCTTTCTAAAGCGACTCCTCTGATGAGAGGCTTGCAGGATGTTGGACTCGAAATTGCCCCATTGAAAACGATCCTTTCATCTCCCGTGGATTCGCATGTTTCTCAGAAAATCTTAATCAACGAGGGTGTTCGGGCTCTGGCAAGTGATAGTCTTTGCACGGGAAGAACACTCCAGGCAAATGGAGCTAGGCAAATGACATACCGAACAAAGAGGAGCTGTCCTTTTTATTTCCCGGCCAAGTCTAATGATTTGCTTGATTACAAAGAGAGACCAGCCCTTCTTGAGATGCCATCTCCAAACGGAGGGAAGTTCCCTTATCACGGTTCTTTGGTTGGAGAGACTGAATCAACTTTCATGGATGATGCTGAATCCGGCTCTTCAGAAACAGACTTCACTGAGTCTACTGTTTCTGATTCAGATTCTTCTGAGACAGAACCAGACATGGATGTAAAGATGGCTATACTTGCAGAAACTGGCCGGGAATTTGAAGAACATGAAAACACTAGCAGTGAGGAGCCCGATGATTTAGCAGTGACCAGCGACATGCCTCACCTCTATCCTCGTGAACTGATAACATGTCATGAAGCCGTGTCTAAATGGCAACTGAAAGGGAAAAGAAATAATCGGAATCTCATAAAGAGGTCTTATGGTGCCCCTGACGGAAAAGGTATTATATATGGAGCAGAAGGGGACTTCGAAGAAGGAAGAACTAATTTAAGTCACAAGAGTTTGCATTGCTACGAAAATGGTTTTAGTGATGCACTTTATGAGGATGATCAAATGCTTGAATTGGAAGATGAAGACTCTCTCACTCCTAGACCTGTATCAAAATTTCAAAATAAAATTCATCGTGGTACTGATTGGAATGACTTGACCTGGGATGAAAATGTTGCTTCAAAAGAATATTGGGATATGAAGGAATATAATCCAACATATGGTGATCGTTATCATGTTGGTAGGAGGATGAGGTCGATGCTGATTAACGTAGATGTCAGGGTTCAAGCAGGATATCGGAAGGAGCCTGTGCCCATTATTTCTCTCATGAGTAAGTTAGATGGGAAGGCAATAATAGGGCACCCAATCCAGGTTGAGGTCCTTAAAGATGGTTCTTCAGATACTTTCTTTTCTGCAATTGACGACTTCAGTAATGAGGGGATTGGTATTGAGGGTAGTGTGCTTCCACAAGCATGGAGGACTGCAAGGAGAACAGCAAATTTTCGTGTCCCTCGCCCCCATGTGTTTTTATCAACTGGTGCCGAAGCTCCTGTTGACTTTCCCTCATTAGATCAAGAACAAAACTTTGATTATGAAAAACTAAACACTGGAAGTTCCAGTCATAATGCAAGCCTTCAAAAGAAGAGCGGCGACAAAAAGTTCTTTGAAAATGTGCCAAAGAAGTTGAGCTTGTCATCTAACCAGAAGATTAGAACTCTGTCCTCATCATCTGCTGAACATAGTGTTAGAAATCCATTGCATGATATCAGTAGCTACCAAACAGATAGATTAATCAAACCAGAAATCTCTGGGCCCACCACAGTAGCTTGCATACCGGTCCAGCTAGTACATAGAAGATTACTTGAAAAGATTAGTAGGCCTCCATTAAAAGCCGCTAGTAATGCAGCTTTGCTTAGTACTGGTGTGGAGAGAAATTCTTAG 2211 0.4292 MDCGVGSIVWVRRRNGSWWPGQIIGPDDHSTSHLTSPPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDYIEKIEASHEMPLKKREKYARREDAILHALELERELVKKQVKLDNAYDQRDCRRSNSVKKGVVVALPVETEGNDDDDDEKHANLKSYRSCENEIDGGCFPLEVARDVEVDLSKATPLMRGLQDVGLEIAPLKTILSSPVDSHVSQKILINEGVRALASDSLCTGRTLQANGARQMTYRTKRSCPFYFPAKSNDLLDYKERPALLEMPSPNGGKFPYHGSLVGETESTFMDDAESGSSETDFTESTVSDSDSSETEPDMDVKMAILAETGREFEEHENTSSEEPDDLAVTSDMPHLYPRELITCHEAVSKWQLKGKRNNRNLIKRSYGAPDGKGIIYGAEGDFEEGRTNLSHKSLHCYENGFSDALYEDDQMLELEDEDSLTPRPVSKFQNKIHRGTDWNDLTWDENVASKEYWDMKEYNPTYGDRYHVGRRMRSMLINVDVRVQAGYRKEPVPIISLMSKLDGKAIIGHPIQVEVLKDGSSDTFFSAIDDFSNEGIGIEGSVLPQAWRTARRTANFRVPRPHVFLSTGAEAPVDFPSLDQEQNFDYEKLNTGSSSHNASLQKKSGDKKFFENVPKKLSLSSNQKIRTLSSSSAEHSVRNPLHDISSYQTDRLIKPEISGPTTVACIPVQLVHRRLLEKISRPPLKAASNAALLSTGVERNS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2406 736 Coils Coil 104 124 - -
Mtr4g2406 736 PANTHER T17B22.17 PROTEIN-RELATED 250 734 IPR044679 -
Mtr4g2406 736 PANTHER T17B22.17 PROTEIN-RELATED 2 148 IPR044679 -
Mtr4g2406 736 ProSiteProfiles PWWP domain profile. 5 61 IPR000313 -
Mtr4g2406 736 MobiDBLite consensus disorder prediction 304 326 - -
Mtr4g2406 736 SUPERFAMILY Tudor/PWWP/MBT 4 110 - -
Mtr4g2406 736 Gene3D - 1 121 - -
Mtr4g2406 736 MobiDBLite consensus disorder prediction 304 332 - -
Mtr4g2406 736 Pfam PWWP domain 6 87 IPR000313 -
Mtr4g2406 736 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 250 734 - -
Mtr4g2406 736 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2406 Mtr-Chr4 37658462 37661860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2406 - - aprc:113864977 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2406 4 37658462 37661860 Mtr4g2406 4 37658462 37661860 ECH