Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2396 ATGACGACGTCGTTCGCCGCAGCGGCGCTCAGAGACCCCAAACTTCAGATCCCTACCTACCATGGCTTCCGTTCTTCTTCATCCTCCGCCGCCCGCAATGCCCTCTCCATCCCTCGCTCCTCCTCCTCCCTCATTCGCGCTGTTTACACGCCTGCAAAGACTGAAACTGCAACTGAGAAGCGTAGCAAAGTTGAGATATTCAAGGAACAAAGCAATTTCATAAGATATCCTCTTAATGAAGATATGTTGAATGATGCACCTAATTTAAGCGAAGCTGCAACACAATTGATTAAGTTTCATGGTAGTTATCAGCAGTATAATCGTGACGAGCGTGGTTCGAGGACTTATTCCTTTATGATAAGGACGAAGAATCCTTGTGGTAAAGTTTCAAACCAGCTTTACTTGACTATGGATGACCTTGCTGATCAGTTTGGAATTGGGACGCTTCGTTTGACTACTAGACAAACATTTCAGCTTCATGGTGTTGTTAAGAAGGATCTTAAACATGTGATGGGGGAGATTATTAGGAATATGGGCTCGAGTCTTGGGGCATGTGGTGATCTTAATAGGAATGTGCTTGCTCCTGCTGCTCCGATTGTCAGGAAAGATTATCTCTTTGCTCAGGAAACGGCGGAGAATATTGCTGCACTTTTGACTCCTCAATCGGGTTTCTATTATGATGTTTGGGTAGATGGGGAGAGAGTTATGTCAGCGGAACCGCCCGAGGTGATTCAGGCACGAAACGATAATTCTCATGGTACGAACTTCCCGGATTCAGCTGAGCCCATTTATGGAACCCAGTTCTTGCCGAGGAAATTTAAAATTGCAGTTACCGTGCCAACTGATAATTCTGTGGATATTCTCACAAATGATATTGGTGTTGTTGTTGTCACTGATGATAATGGGGAGCCTCAAGGATTCAACATATATGTTGGTGGGGGGATGGGAAGAGCACATAGGAATGAAGCCACTTTTCCCCGCTTGGCTGAACCGTTGGGTTACGTGCCAAAAGAGGATATTTTGTATGCGGTGAAAGCAATTGTTGTTACACAACGAGAAAATGGAAGAAGAGATGATCGCAAGTATAGTAGAATGAAATATCTCATCAATTCTTGGGGAATAGAGAAGTTCAGAAGTGTAACTGAGCAATATTATGGCAAGAAGTTTGAACCTTTCCGCAGCTTGCCAGAATGGGAATTCAAAAGTTATCTTGGGTGGCATCAGCAGGGTAATGGCGGTTTATACTGCGGGCTTCATGTTGACAATGGTCGTATTGGTGGAAAAATGAAAACAGCACTGAGGGAGGTTATTGAAAAGTATAATTTGAATGTTAGGTTAACTCCAAATCAGAACATCATATTGACTGATATTCGTGCTGCATGGAAACGTCCGATCACAACCATTCTTTCTCAGGCTGGTCTGCTGCAACCAAAATATGTAGATCCCCTTAATGTAACGGCAATGGCATGCCCGGCTTTCCCATTATGTCCCCTGGCAATTACTGAAGCTGAACGTGGGATACCAAGTATTCTTAAGCGGATTCGTGCCATGTTTGAGAAGGTTGGTCTGAAGTATAGCGAATCTGTCGTTGTAAGGATAACTGGCTGCCCTAATGGTTGTGCTAGACCTTATATGGCAGAACTAGGACTGGTTGGTGATGGCCCAAATAGCTATCAGGTTTGGCTTGGAGGCAGCAGTAACCAAATGTCATTAGCTCGAAGTTTCATGGACAAGGTGAAGCTTCAAGACCTTGAAACAGTTTTGGAGCCATTGTTTTATCATTGGAAGCAAAAGCGTCAATCTAAAGAATCATTTGGCGACTTCACAGCTCGACTGGGATTTGAGAAGCTTAAAGAATTTATTGAGAAATGGGAGGGTCCAGTAGTAGCAGCAACACGCCACAACTTGAAGCTTTTTACTGATAAAGAGACATACGAAGCAATGGATGGATTAGCTAAACTTCAAAACAAGAGTGCTCATCAGTTAGCCATAGAAGTTATCCGCAATTATGTTGCATCAAACCAAAATGGAAAAGGTGAATTTTAA 2046 0.434 MTTSFAAAALRDPKLQIPTYHGFRSSSSSAARNALSIPRSSSSLIRAVYTPAKTETATEKRSKVEIFKEQSNFIRYPLNEDMLNDAPNLSEAATQLIKFHGSYQQYNRDERGSRTYSFMIRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVVKKDLKHVMGEIIRNMGSSLGACGDLNRNVLAPAAPIVRKDYLFAQETAENIAALLTPQSGFYYDVWVDGERVMSAEPPEVIQARNDNSHGTNFPDSAEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGVVVVTDDNGEPQGFNIYVGGGMGRAHRNEATFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLINSWGIEKFRSVTEQYYGKKFEPFRSLPEWEFKSYLGWHQQGNGGLYCGLHVDNGRIGGKMKTALREVIEKYNLNVRLTPNQNIILTDIRAAWKRPITTILSQAGLLQPKYVDPLNVTAMACPAFPLCPLAITEAERGIPSILKRIRAMFEKVGLKYSESVVVRITGCPNGCARPYMAELGLVGDGPNSYQVWLGGSSNQMSLARSFMDKVKLQDLETVLEPLFYHWKQKRQSKESFGDFTARLGFEKLKEFIEKWEGPVVAATRHNLKLFTDKETYEAMDGLAKLQNKSAHQLAIEVIRNYVASNQNGKGEF* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2396 681 Gene3D Sulfite Reductase Hemoprotein;Domain 2 116 188 - -
Mtr4g2396 681 Gene3D Sulfite Reductase Hemoprotein;Domain 2 393 477 - -
Mtr4g2396 681 Gene3D Sulfite Reductase Hemoprotein, domain 1 189 392 IPR045854 -
Mtr4g2396 681 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 58 185 IPR036136 GO:0016491
Mtr4g2396 681 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 407 460 IPR005117 GO:0016491
Mtr4g2396 681 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 115 173 IPR005117 GO:0016491
Mtr4g2396 681 PRINTS Sirohaem Fe-binding site signature 485 503 IPR006066 GO:0016491|GO:0020037|GO:0051536
Mtr4g2396 681 PRINTS Sirohaem Fe-binding site signature 534 552 IPR006066 GO:0016491|GO:0020037|GO:0051536
Mtr4g2396 681 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 534 550 IPR006066 GO:0016491|GO:0020037|GO:0051536
Mtr4g2396 681 TIGRFAM sir: sulfite reductase, ferredoxin dependent 52 624 IPR011787 GO:0020037|GO:0050311|GO:0051539
Mtr4g2396 681 Pfam Nitrite and sulphite reductase 4Fe-4S domain 485 623 IPR006067 GO:0016491|GO:0020037|GO:0051536
Mtr4g2396 681 Pfam Nitrite and sulphite reductase 4Fe-4S domain 211 389 IPR006067 GO:0016491|GO:0020037|GO:0051536
Mtr4g2396 681 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 483 634 IPR045854 -
Mtr4g2396 681 PANTHER BNAA01G31570D PROTEIN 36 626 - -
Mtr4g2396 681 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 404 477 IPR036136 GO:0016491
Mtr4g2396 681 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 36 626 IPR045169 GO:0016491|GO:0020037|GO:0051536
Mtr4g2396 681 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 186 401 IPR045854 -
Mtr4g2396 681 Gene3D Sulfite Reductase Hemoprotein, domain 1 481 628 IPR045854 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2396 K00392 - gmx:547693 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2396 4 37546520 37551036 Mtr4g2396 4 37546520 37551036 ECH