Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2390 ATGGCTTCTGTTGTACCTGTTCTTCTTCCTAACACCCTCAACCAACATTCTATCCTCCCATATCCTTCCCATTCCCACCATCTCTTTTCAAAACCCATCAACCACAAATCCAACATCCTTTTCCTTTCCAATTCCAAAAAACCTAATAATTCGCCAATATTATTCCTCAAATGCTCTTCTTCTTCGTCCACTATGAACCAACTGCACGAAGAGGAAGAGGAAGAGGAAGAGGAAGATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCACCACTGCCTCCGTTGAGCGAGGTATGGAGAGAAATCCAAGGCGAGAACGACTGGGAAGGTCTATTAGATCCAATGGATCCTATCCTACGCAAAGAAATCATTCGCTATGGTGAGCTAGCTCAAGCATGTTACGATTCATTCGACTTCGATCAAAACTCAAAATATTGTGGAACATGCAAGTATCATCCTGCACATTTCTTTGAGAAACTTTACATGGGAGATGGATACACCATAAGCCGCTACCTCTATGCAACATCAAATATCAATCTTCCAAAATTCTTCAAGAAATCTAAGATCTCTTCTGTTTGGAGCCCTTATGCTAATTGGATGGGATACATAGCTGTTTCCACCAACGAAGAAGAGATTAAACGATTAGGACGCCGTGACATAGTGATTGCATGGAGGGGCACCGTGACATACATAGAATGGATATACGACCTAAAAGACATACTACACGAAGCAAACTTCAAAAACGACCCATCAATCAAAGTAGAAACAGGATTCTACGATTTATACACCAAGAAAGAACAATCATGCACTTATTGTTCATTCTCAGCTCGAGAACAAGTACTCTCAGAAATTAAACGACTTCTTCAATTCTACCAAGGTGAAAAAATCAGTATCACAGTCACAGGACACAGTCTTGGTGCTGCCCTAGCCGTACTCAGCGCTTACGACATAGCCGAGTTAGGAGTGAACATCATTGAAGATGGTGACAAAACAACTAACGTCCCCATAACGGTTTACTCGTTCGCAGGGCCGAGAGTTGGGAATTTGCATTTTAAAGAAAGGTGTGAAGAACTTGGTGTAAAAGTTTTGAGAATACATAATATTCATGACAAAGTTCCAACCGTGCCGGGGATTATAACCAATGAGAAATTTCAGTTTCAAAAGTATATAGAAGATACATTGTCTTTTCCTTGGAGTTATGCTCATGTTGGAACTGAAATTAAATTGGATCATAGAAATAGTCCTTTTTTGAAGGAAAATGGTGATTTGGGGTGTACACATAATTTAGAGGTACTTTTGCATTTGATGGATGGGTATCATGGGAAAGATAAAAAATTTAATATGGTTACAGAAAGGGATATTGCACTTGTGAATAAGAGCTGTGATCTTCTACGGAGTGAGTTTGGTGTTCCACCACATTGGAGACAAGATGAGAATAAAGGGATGGTTCAAACCGCCGATGGACGGTGGGTTGTGCCGGAACGGCCTCTATTGGAAGCTCATCCACCAGATATTGCACATCATCTTGCATTAGTGCTTAAAAATCGCATTCAAAATCGCATTGGTAGCTTCCAATCAAGGACCACCTGA 1605 0.4044 MASVVPVLLPNTLNQHSILPYPSHSHHLFSKPINHKSNILFLSNSKKPNNSPILFLKCSSSSSTMNQLHEEEEEEEEEDEDEEEEEEEEEEEEESPLPPLSEVWREIQGENDWEGLLDPMDPILRKEIIRYGELAQACYDSFDFDQNSKYCGTCKYHPAHFFEKLYMGDGYTISRYLYATSNINLPKFFKKSKISSVWSPYANWMGYIAVSTNEEEIKRLGRRDIVIAWRGTVTYIEWIYDLKDILHEANFKNDPSIKVETGFYDLYTKKEQSCTYCSFSAREQVLSEIKRLLQFYQGEKISITVTGHSLGAALAVLSAYDIAELGVNIIEDGDKTTNVPITVYSFAGPRVGNLHFKERCEELGVKVLRIHNIHDKVPTVPGIITNEKFQFQKYIEDTLSFPWSYAHVGTEIKLDHRNSPFLKENGDLGCTHNLEVLLHLMDGYHGKDKKFNMVTERDIALVNKSCDLLRSEFGVPPHWRQDENKGMVQTADGRWVVPERPLLEAHPPDIAHHLALVLKNRIQNRIGSFQSRTT* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2390 534 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 36 520 - -
Mtr4g2390 534 Coils Coil 65 95 - -
Mtr4g2390 534 CDD Lipase_3 176 418 - -
Mtr4g2390 534 Gene3D alpha/beta hydrolase 103 507 IPR029058 -
Mtr4g2390 534 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 36 520 - -
Mtr4g2390 534 SUPERFAMILY alpha/beta-Hydrolases 126 445 IPR029058 -
Mtr4g2390 534 Pfam Lipase (class 3) 226 383 IPR002921 GO:0006629
Mtr4g2390 534 MobiDBLite consensus disorder prediction 64 102 - -
Mtr4g2390 534 MobiDBLite consensus disorder prediction 69 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2390 Mtr-Chr4 37505706 37509536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2390 100 518 Acyl Lipid Metabolism Gene Families AT1G51440 70.930 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2390 - - mtr:MTR_4g077070 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2390 4 37505706 37509536 Mtr4g2390 4 37505706 37509536 ECH